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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2439 and Rru_A2440 are separated by 39 nucleotides
Rru_A2440 and Rru_A2441 are separated by 426 nucleotides
Rru_A2441 and Rru_A2442 are separated by 136 nucleotides
Rru_A2442 and Rru_A2443 overlap by 1 nucleotides
Rru_A2439: Rru_A2439 - Mammalian cell entry related (NCBI), at 2,836,448 to 2,837,263
_A2439
Rru_A2440: Rru_A2440 - NADH:ubiquinone oxidoreductase 17.2 kD subunit (NCBI), at 2,837,303 to 2,837,659
_A2440
Rru_A2441: Rru_A2441 - Ribonucleoside-diphosphate reductase (NCBI), at 2,838,086 to 2,841,781
_A2441
Rru_A2442: Rru_A2442 - Transcriptional Regulator, XRE family (NCBI), at 2,841,918 to 2,842,178
_A2442
Rru_A2443: Rru_A2443 - HipA protein (NCBI), at 2,842,178 to 2,843,485
_A2443
Group
Condition
Rru
_A2439
Rru
_A2440
Rru
_A2441
Rru
_A2442
Rru
_A2443
carbon source
Hexanoic 21 mM; anaerobic
-1.1
-2.7
N.D.
N.D.
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.6
-2.0
N.D.
N.D.
+0.2
light
Succinic Acid; Light intensity 9 uM
-1.3
-0.9
N.D.
N.D.
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.4
-0.7
N.D.
N.D.
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.4
-1.7
N.D.
N.D.
-0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-1.9
N.D.
N.D.
+0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-1.8
N.D.
N.D.
+0.2
carbon source
Valeric 25 mM; anaerobic
-0.7
-0.8
N.D.
N.D.
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-1.0
N.D.
N.D.
-0.4
light
Succinic Acid; Light intensity 18 uM
-0.9
-0.6
N.D.
N.D.
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.9
N.D.
N.D.
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-0.7
N.D.
N.D.
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
-1.1
N.D.
N.D.
+0.1
anaerboic nitrogen source
Low light with ammonium chloride
-0.2
-0.8
N.D.
N.D.
+0.0
light
Succinic Acid; Light intensity 75 uM
-0.6
-0.5
N.D.
N.D.
+0.1
light
Succinic Acid; Light intensity 18 uM
+0.0
-0.9
N.D.
N.D.
+0.0
light
Succinic Acid; Light intensity 38 uM
-0.3
-0.7
N.D.
N.D.
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.1
-0.7
N.D.
N.D.
-0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.8
+0.1
N.D.
N.D.
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.4
+0.5
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 9 uM
+0.9
-0.7
N.D.
N.D.
+0.0
light
Succinic Acid; Light intensity 75 uM
+1.0
-0.9
N.D.
N.D.
+0.1
light
acetate; Light intensity 9 uM
+1.2
-0.7
N.D.
N.D.
+0.1
carbon source
Valeric 25 mM; anaerobic
+0.6
-0.2
N.D.
N.D.
+0.2
light
acetate; Light intensity 18 uM
+0.4
+0.5
N.D.
N.D.
+0.0
light
acetate; Light intensity 18 uM
+1.0
-0.0
N.D.
N.D.
+0.0
light
acetate; Light intensity 75 uM
+1.7
-0.1
N.D.
N.D.
+0.0
light
acetate; Light intensity 38 uM
+0.9
+1.0
N.D.
N.D.
+0.9
light
Succinic Acid; Light intensity 150 uM
+2.2
+0.5
N.D.
N.D.
+0.4
light
Succinic Acid; Light intensity 150 uM
+2.4
+2.5
N.D.
N.D.
+0.6
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