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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2363 and Rru_A2364 are separated by 111 nucleotides
Rru_A2364 and Rru_A2365 are separated by 138 nucleotides
Rru_A2365 and Rru_A2366 are separated by 150 nucleotides
Rru_A2366 and Rru_A2367 are separated by 179 nucleotides
Rru_A2363: Rru_A2363 - Endonuclease/exonuclease/phosphatase (NCBI), at 2,753,534 to 2,754,301
_A2363
Rru_A2364: Rru_A2364 - Hemimethylated DNA-binding region (NCBI), at 2,754,413 to 2,754,742
_A2364
Rru_A2365: Rru_A2365 - ATP-dependent helicase HrpB (NCBI), at 2,754,881 to 2,757,463
_A2365
Rru_A2366: Rru_A2366 - chemotaxis sensory transducer (NCBI), at 2,757,614 to 2,759,296
_A2366
Rru_A2367: Rru_A2367 - Response regulator receiver domain protein (CheY) (NCBI), at 2,759,476 to 2,759,877
_A2367
Group
Condition
Rru
_A2363
Rru
_A2364
Rru
_A2365
Rru
_A2366
Rru
_A2367
carbon source
Hexanoic 21 mM; anaerobic
-2.4
-0.5
+0.1
-0.2
-0.8
carbon source
Hexanoic 21 mM; anaerobic
-2.9
+0.0
-0.3
+0.0
-0.3
carbon source
Valeric 25 mM; anaerobic
-1.7
-0.3
-0.0
-0.2
-0.4
carbon source
Hexanoic 21 mM; anaerobic
-2.2
+0.1
-0.2
-0.1
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.8
-0.4
+0.0
+0.2
-0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.6
-0.1
-0.1
-0.2
-0.5
carbon source
Valeric 25 mM; anaerobic
-2.0
-0.2
-0.1
+0.1
-0.0
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-1.5
+0.1
+0.2
+0.0
-1.0
carbon source
Hexanoic 21 mM; anaerobic
-2.2
+0.5
-0.1
-0.0
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-1.6
+0.1
-0.0
+0.1
-0.5
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.1
-0.4
-0.0
-0.1
-0.3
light
Succinic Acid; Light intensity 18 uM
-1.0
-0.3
+0.0
-0.2
-0.4
carbon source
Succinate (C)
-1.2
-0.0
-0.1
-0.1
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.7
+0.0
-0.1
+0.0
+0.2
smn_rich
SMN_rich
-1.4
+0.0
-0.2
-0.0
+0.2
smn_rich
SMN_rich
-1.4
+0.0
+0.0
-0.0
+0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.8
-0.4
+0.1
+0.2
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.8
-0.5
+0.0
+0.2
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-1.6
+0.1
+0.3
+0.0
+0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-1.6
+0.3
+0.2
+0.0
+0.8
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.0
+0.1
+0.2
+0.1
+0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.2
-0.0
+0.0
+0.2
+0.9
anaerboic nitrogen source
Low light with ammonium chloride
+0.8
+0.3
-0.3
-0.1
+0.2
light
acetate; Light intensity 18 uM
+0.3
-0.2
+0.2
-0.0
+0.9
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.3
+0.2
-0.0
+0.4
+0.7
light
acetate; Light intensity 18 uM
+0.7
-0.4
+0.0
+0.0
+1.5
light
acetate; Light intensity 75 uM
+1.0
-0.1
+0.1
+0.1
+1.6
light
acetate; Light intensity 38 uM
+1.5
-0.2
+0.6
-0.1
+2.2
light
Succinic Acid; Light intensity 150 uM
+2.2
-0.2
+0.1
+0.1
+2.9
light
Succinic Acid; Light intensity 150 uM
+3.2
+0.1
-0.1
+0.1
+4.3
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