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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2345 and Rru_A2346 are separated by 18 nucleotides
Rru_A2346 and Rru_A2347 are separated by 48 nucleotides
Rru_A2347 and Rru_A2348 are separated by 220 nucleotides
Rru_A2348 and Rru_A2349 overlap by 4 nucleotides
Rru_A2345: Rru_A2345 - Glycosyl transferase, group 1 (NCBI), at 2,718,667 to 2,719,698
_A2345
Rru_A2346: Rru_A2346 - hypothetical protein (NCBI), at 2,719,717 to 2,720,619
_A2346
Rru_A2347: Rru_A2347 - hypothetical protein (NCBI), at 2,720,668 to 2,722,044
_A2347
Rru_A2348: Rru_A2348 - Glycosyl transferase (NCBI), at 2,722,265 to 2,727,778
_A2348
Rru_A2349: Rru_A2349 - hypothetical protein (NCBI), at 2,727,775 to 2,728,638
_A2349
Group
Condition
Rru
_A2345
Rru
_A2346
Rru
_A2347
Rru
_A2348
Rru
_A2349
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.3
-2.0
-0.9
-1.3
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.3
-1.3
-1.0
-1.4
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.8
-1.6
-0.6
-0.7
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.8
-0.3
-0.7
-0.6
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.6
-0.4
-0.6
-0.5
-0.4
carbon source
Valeric 25 mM; anaerobic
-0.3
-2.7
+0.3
-0.1
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-2.2
+0.3
-0.0
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
-0.7
-0.2
-0.3
-0.2
light
Succinic Acid; Light intensity 18 uM
+0.2
-1.8
+0.0
+0.2
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-0.1
-0.2
-0.3
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.0
-0.4
-0.2
-0.3
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-1.2
+0.2
+0.0
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.3
-0.2
-0.2
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
-0.2
-0.2
-0.2
-0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.1
-0.7
-0.2
-0.0
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-0.7
+0.1
+0.2
-0.2
light
acetate; Light intensity 18 uM
+0.1
-0.5
-0.2
-0.1
+0.0
anaerboic nitrogen source
SMN_rich_anaerobic
+0.0
-0.7
+0.0
+0.1
-0.1
light
Succinic Acid; Light intensity 75 uM
+0.1
-0.4
+0.0
-0.1
-0.2
carbon source
Valeric 25 mM; anaerobic
+0.1
-0.6
+0.2
-0.1
-0.2
light
acetate; Light intensity 18 uM
+0.3
-0.8
-0.0
+0.0
-0.0
light
acetate; Light intensity 9 uM
+0.2
-0.6
-0.1
-0.0
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.6
+0.3
-0.0
+0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
+0.4
-0.1
-0.1
-0.4
light
acetate; Light intensity 38 uM
-0.1
+0.4
-0.1
+0.3
-0.4
carbon source
Hexanoic 21 mM; anaerobic
+0.1
+0.6
+0.1
-0.3
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
+0.7
+0.0
-0.1
-0.2
light
Succinic Acid; Light intensity 150 uM
+0.6
-0.2
+0.4
+0.1
-0.1
light
Succinic Acid; Light intensity 18 uM
-0.1
+2.1
-0.0
-0.6
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
+0.9
+0.1
-0.1
+0.1
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