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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
11723723 and Rru_A2306 are separated by 204 nucleotides
Rru_A2306 and Rru_A2307 are separated by 17 nucleotides
Rru_A2307 and Rru_A2308 are separated by 162 nucleotides
Rru_A2308 and Rru_A2309 are separated by 112 nucleotides
11723723 - no description, at 2,669,621 to 2,669,657
11723723
Rru_A2306: Rru_A2306 - hypothetical protein (NCBI), at 2,669,862 to 2,670,212
_A2306
Rru_A2307: Rru_A2307 - Twin-arginine translocation pathway signal (NCBI), at 2,670,230 to 2,671,585
_A2307
Rru_A2308: Rru_A2308 - Transcriptional Regulator, ArsR family (NCBI), at 2,671,748 to 2,672,080
_A2308
Rru_A2309: Rru_A2309 - NADH peroxidase (NCBI), at 2,672,193 to 2,673,857
_A2309
Group
Condition
11723723
Rru
_A2306
Rru
_A2307
Rru
_A2308
Rru
_A2309
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
-0.2
-1.1
-1.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.3
-1.3
+0.2
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
-0.1
-1.1
+0.0
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
+0.3
-1.7
+0.4
light
Succinic Acid; Light intensity 38 uM
N.D.
N.D.
+0.0
-2.0
+1.0
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
+0.0
-1.6
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
-0.4
-0.5
+0.0
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
-0.1
-0.5
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.0
-1.0
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
-0.5
-0.4
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
-0.1
-0.7
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
+0.0
-1.1
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
-0.0
-0.6
+0.0
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
+0.2
-1.2
+0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.2
-0.9
+0.7
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.2
-0.4
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.0
-0.6
+0.2
light
acetate; Light intensity 38 uM
N.D.
N.D.
+0.2
-0.6
-0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
+0.1
-0.7
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
+0.0
-0.5
+0.2
light
acetate; Light intensity 75 uM
N.D.
N.D.
+0.2
-0.4
+0.0
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
+0.0
-0.9
+0.7
light
acetate; Light intensity 9 uM
N.D.
N.D.
+0.2
-0.3
-0.1
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
-0.1
-0.3
+0.3
light
acetate; Light intensity 18 uM
N.D.
N.D.
+0.3
-0.3
-0.0
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
-0.3
-0.9
+1.3
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
+0.3
-0.2
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.3
+0.3
-0.2
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
+0.5
+0.0
+0.1
carbon source
Succinate (C)_noKan
N.D.
N.D.
+0.1
+0.4
+0.2
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