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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2274 and Rru_A2275 overlap by 4 nucleotides
Rru_A2275 and Rru_A2276 overlap by 4 nucleotides
Rru_A2276 and Rru_A2277 are separated by 5 nucleotides
Rru_A2277 and Rru_A2278 are separated by 394 nucleotides
Rru_A2274: Rru_A2274 - ABC transporter component (NCBI), at 2,632,950 to 2,633,735
_A2274
Rru_A2275: Rru_A2275 - Binding-protein-dependent transport systems inner membrane component (NCBI), at 2,633,732 to 2,634,631
_A2275
Rru_A2276: Rru_A2276 - Binding-protein-dependent transport systems inner membrane component (NCBI), at 2,634,628 to 2,635,572
_A2276
Rru_A2277: Rru_A2277 - Nickel ABC transporter, periplasmic nickel-binding (NCBI), at 2,635,578 to 2,637,239
_A2277
Rru_A2278: Rru_A2278 - Transposase IS66 (NCBI), at 2,637,634 to 2,638,983
_A2278
Group
Condition
Rru
_A2274
Rru
_A2275
Rru
_A2276
Rru
_A2277
Rru
_A2278
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-1.1
-0.5
-0.4
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-1.3
-0.5
-0.3
-0.3
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.1
-0.1
+0.1
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-1.4
+0.0
-0.0
-0.2
carbon source
Valeric 25 mM; anaerobic
N.D.
-1.1
-0.1
+0.1
-0.4
light
acetate; Light intensity 75 uM
N.D.
-0.8
-0.0
-0.1
-0.1
light
Succinic Acid; Light intensity 38 uM
N.D.
-0.9
+0.2
+0.2
-0.1
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.5
+0.1
+0.2
-0.4
light
acetate; Light intensity 9 uM
N.D.
-0.5
+0.1
+0.0
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.4
+0.1
+0.0
-0.1
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.4
+0.2
+0.1
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.2
+0.2
-0.2
-0.5
light
Succinic Acid; Light intensity 9 uM
N.D.
-0.6
+0.1
+0.1
+0.2
carbon source
Succinate (C)
N.D.
+0.2
-0.2
-0.1
-0.1
light
Succinic Acid; Light intensity 75 uM
N.D.
-0.5
+0.1
+0.1
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.4
+0.7
-0.4
+0.0
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.3
+0.1
+0.1
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.3
+0.2
-0.1
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.1
+0.6
-0.2
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.0
+0.1
+0.0
+0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.4
+0.1
+0.1
-0.0
light
acetate; Light intensity 38 uM
N.D.
+1.1
-0.0
-0.2
-0.2
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.7
-0.0
+0.0
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.2
+0.7
-0.2
+0.4
light
Succinic Acid; Light intensity 9 uM
N.D.
+0.9
-0.1
-0.1
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.7
-0.0
+0.0
+0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.5
-0.0
+0.3
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.7
-0.0
+0.2
+0.2
light
Succinic Acid; Light intensity 150 uM
N.D.
+1.5
-0.1
-0.0
+0.9
light
Succinic Acid; Light intensity 18 uM
N.D.
+2.0
-0.0
-0.0
+0.4
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