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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2267 and Rru_A2268 are separated by 197 nucleotides
Rru_A2268 and Rru_A2269 are separated by 23 nucleotides
Rru_A2269 and Rru_A2270 are separated by 26 nucleotides
Rru_A2270 and Rru_A2271 are separated by 48 nucleotides
Rru_A2267: Rru_A2267 - Electron transfer flavoprotein beta-subunit (NCBI), at 2,627,664 to 2,628,515
_A2267
Rru_A2268: Rru_A2268 - Nitrogen fixation protein NifW (NCBI), at 2,628,713 to 2,629,075
_A2268
Rru_A2269: Rru_A2269 - Pyruvate carboxyltransferase (NCBI), at 2,629,099 to 2,630,277
_A2269
Rru_A2270: Rru_A2270 - Nitrogen-fixing NifU-like (NCBI), at 2,630,304 to 2,630,603
_A2270
Rru_A2271: Rru_A2271 - HesB/YadR/YfhF (NCBI), at 2,630,652 to 2,630,984
_A2271
Group
Condition
Rru
_A2267
Rru
_A2268
Rru
_A2269
Rru
_A2270
Rru
_A2271
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-3.0
-0.3
-2.8
N.D.
-1.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-2.8
-0.5
-2.5
N.D.
-1.9
light
acetate; Light intensity 18 uM
-1.1
-1.3
+0.2
N.D.
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.5
-0.3
-1.1
N.D.
-0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.6
-0.1
-0.8
N.D.
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-1.2
-0.7
N.D.
+0.3
carbon source
Hexanoic 21 mM; anaerobic
-1.5
+1.1
-0.4
N.D.
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-1.1
-0.6
N.D.
+0.4
light
acetate; Light intensity 75 uM
-0.9
+0.5
+0.2
N.D.
-0.5
carbon source
Valeric 25 mM; anaerobic
-0.5
+0.7
-0.7
N.D.
-0.2
light
acetate; Light intensity 9 uM
-1.4
+0.8
+0.1
N.D.
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.9
-1.5
+0.1
N.D.
+0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+1.7
-0.7
-0.3
N.D.
-0.1
light
acetate; Light intensity 38 uM
-1.7
+1.3
+0.3
N.D.
+0.8
carbon source
Hexanoic 21 mM; anaerobic
-1.0
+1.2
+0.6
N.D.
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.9
-1.3
+0.1
N.D.
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.8
+1.5
+0.4
N.D.
+0.0
light
acetate; Light intensity 38 uM
-0.4
-0.1
+1.5
N.D.
+0.1
light
Succinic Acid; Light intensity 18 uM
+1.9
+0.3
-0.8
N.D.
-0.3
light
Succinic Acid; Light intensity 9 uM
+1.9
-0.1
-0.1
N.D.
-0.5
light
Succinic Acid; Light intensity 9 uM
+2.4
-1.1
+0.3
N.D.
-0.1
light
Succinic Acid; Light intensity 38 uM
+1.7
-0.7
+0.4
N.D.
+0.1
light
Succinic Acid; Light intensity 18 uM
+3.3
-3.0
+0.8
N.D.
+0.5
light
Succinic Acid; Light intensity 75 uM
+3.2
-1.0
+0.0
N.D.
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+3.0
+0.6
-0.7
N.D.
-0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
+2.9
+0.0
-0.0
N.D.
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+3.0
+0.3
-0.4
N.D.
+0.0
light
Succinic Acid; Light intensity 150 uM
+4.8
-0.2
+0.6
N.D.
-0.2
light
Succinic Acid; Light intensity 75 uM
+7.4
-0.2
-0.1
N.D.
-0.5
light
Succinic Acid; Light intensity 150 uM
+7.6
+0.9
-0.2
N.D.
-0.2
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