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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2255 and Rru_A2256 are separated by 242 nucleotides
Rru_A2256 and Rru_A2257 are separated by 297 nucleotides
Rru_A2257 and Rru_A2258 are separated by 63 nucleotides
Rru_A2258 and Rru_A2259 are separated by 53 nucleotides
Rru_A2255: Rru_A2255 - Uracil phosphoribosyl transferase (NCBI), at 2,616,633 to 2,617,289
_A2255
Rru_A2256: Rru_A2256 - Cytochrome c, class II (NCBI), at 2,617,532 to 2,617,975
_A2256
Rru_A2257: Rru_A2257 - Transcriptional Regulator, LysR family (NCBI), at 2,618,273 to 2,619,187
_A2257
Rru_A2258: Rru_A2258 - hypothetical protein (NCBI), at 2,619,251 to 2,620,078
_A2258
Rru_A2259: Rru_A2259 - hypothetical protein (NCBI), at 2,620,132 to 2,620,611
_A2259
Group
Condition
Rru
_A2255
Rru
_A2256
Rru
_A2257
Rru
_A2258
Rru
_A2259
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+2.1
-0.6
-2.7
-1.4
-0.2
light
Succinic Acid; Light intensity 18 uM
+0.1
-0.0
-0.9
-0.7
-1.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.4
-0.1
-1.3
-0.5
-0.8
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.4
-0.9
-0.2
-0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.3
+0.0
-0.2
-1.0
light
Succinic Acid; Light intensity 9 uM
-0.1
-0.1
-0.2
-0.2
-0.8
light
Succinic Acid; Light intensity 9 uM
+0.1
-0.1
-0.8
-0.3
-0.3
light
Succinic Acid; Light intensity 75 uM
+0.3
-0.2
-0.2
-0.4
-0.8
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
+0.0
+0.1
-0.1
-1.2
carbon source
Valeric 25 mM; anaerobic
+0.3
+0.1
-0.9
-0.4
-0.4
carbon source
Hexanoic 21 mM; anaerobic
-0.2
-0.3
+0.2
-0.3
-0.5
light
Succinic Acid; Light intensity 75 uM
-0.1
-0.3
-0.4
-0.5
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.1
-0.3
+0.3
-0.2
-0.8
carbon source
Hexanoic 21 mM; anaerobic
+0.4
+0.1
-1.0
+0.0
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
-0.0
+0.5
-0.3
-0.9
light
Succinic Acid; Light intensity 18 uM
-0.2
-0.7
-0.1
+0.0
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
-0.4
-0.2
-0.4
+0.5
light
acetate; Light intensity 18 uM
+0.3
-0.4
+0.2
-0.3
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.0
+0.0
+0.6
-0.3
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.5
+0.1
+0.7
-0.3
-0.1
light
acetate; Light intensity 75 uM
-0.0
-0.6
+1.0
-0.1
-0.3
carbon source
Valeric 25 mM; anaerobic
-0.9
+0.2
-0.1
+0.2
+0.5
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.6
+0.1
-0.3
+0.2
+0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
+0.0
+0.6
-0.0
-0.7
light
acetate; Light intensity 18 uM
-0.2
-0.4
+1.0
+0.3
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.0
-0.3
+0.2
-0.2
+0.7
carbon source
Hexanoic 21 mM; anaerobic
-0.7
+0.2
+0.4
+0.2
+0.3
light
Succinic Acid; Light intensity 150 uM
-0.1
-0.3
+2.1
+0.1
-0.0
light
acetate; Light intensity 38 uM
+1.8
-0.1
+1.5
-0.2
-1.0
light
Succinic Acid; Light intensity 150 uM
+0.2
-0.2
+3.3
+0.5
+0.1
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