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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2246 and Rru_A2247 are separated by 191 nucleotides
Rru_A2247 and Rru_A2248 are separated by 428 nucleotides
Rru_A2248 and Rru_A2249 are separated by 325 nucleotides
Rru_A2249 and Rru_A2250 are separated by 246 nucleotides
Rru_A2246: Rru_A2246 - Glucose-1-phosphate adenylyltransferase (NCBI), at 2,608,135 to 2,609,406
_A2246
Rru_A2247: Rru_A2247 - hypothetical protein (NCBI), at 2,609,598 to 2,610,095
_A2247
Rru_A2248: Rru_A2248 - hypothetical protein (NCBI), at 2,610,524 to 2,611,081
_A2248
Rru_A2249: Rru_A2249 - Threonine aldolase (NCBI), at 2,611,407 to 2,612,456
_A2249
Rru_A2250: Rru_A2250 - ABC transporter component (NCBI), at 2,612,703 to 2,613,479
_A2250
Group
Condition
Rru
_A2246
Rru
_A2247
Rru
_A2248
Rru
_A2249
Rru
_A2250
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-2.0
-0.2
+0.0
-0.3
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-2.0
-0.1
-0.0
+0.4
-0.7
carbon source
Hexanoic 21 mM; anaerobic
-1.5
+0.0
-0.1
+0.4
-1.2
carbon source
Hexanoic 21 mM; anaerobic
-2.0
-0.0
-0.0
+0.3
-0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-1.9
-0.2
+0.2
-0.1
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-1.4
-0.4
-0.1
-0.1
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.1
-0.2
-0.1
-0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.0
-0.4
+0.0
-0.0
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-0.4
+0.1
-0.1
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-0.3
+0.2
-0.0
-0.3
anaerboic nitrogen source
Low light with ammonium chloride
-0.9
-0.1
-0.1
+0.2
+0.2
smn_rich
SMN_rich_noKan
-0.5
-0.2
+0.1
-0.1
+0.2
light
Succinic Acid; Light intensity 18 uM
-0.5
+0.1
+0.2
-0.4
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
-0.1
+0.8
-0.4
-0.4
light
acetate; Light intensity 9 uM
-0.6
+0.2
-0.1
+0.5
+0.2
light
acetate; Light intensity 75 uM
-0.7
-0.0
+0.6
+0.6
-0.1
light
Succinic Acid; Light intensity 38 uM
+0.6
+0.3
+0.3
+0.1
-0.8
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.1
+0.3
+0.1
-0.4
-0.3
light
acetate; Light intensity 18 uM
-1.2
+0.4
+0.2
+0.7
+0.9
light
Succinic Acid; Light intensity 18 uM
+0.8
+0.2
+0.3
+0.4
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.1
+0.2
+0.2
-0.2
+0.2
light
Succinic Acid; Light intensity 150 uM
+0.1
+0.1
+0.7
+0.5
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.6
+0.1
+0.2
-0.2
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.4
+0.4
+0.4
-0.2
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.7
-0.0
-0.1
+0.3
+0.0
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+2.5
+0.5
-0.2
-0.5
+0.1
light
Succinic Acid; Light intensity 75 uM
+2.2
+0.5
+0.3
+0.2
-0.4
light
Succinic Acid; Light intensity 150 uM
+0.5
+0.2
+1.4
-0.0
+0.9
light
Succinic Acid; Light intensity 75 uM
+3.7
+0.4
+0.4
-0.0
-0.2
light
acetate; Light intensity 38 uM
+0.3
-0.2
+0.6
+0.6
+3.3
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