Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2221 and Rru_A2222 are separated by 43 nucleotidesRru_A2222 and Rru_A2223 are separated by 47 nucleotidesRru_A2223 and Rru_A2224 are separated by 210 nucleotidesRru_A2224 and Rru_A2225 overlap by 4 nucleotides Rru_A2221: Rru_A2221 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (NCBI), at 2,580,511 to 2,581,104 _A2221 Rru_A2222: Rru_A2222 - Molybdopterin biosynthesis protein (NCBI), at 2,581,148 to 2,582,434 _A2222 Rru_A2223: Rru_A2223 - Branched-chain amino acid aminotransferase I (NCBI), at 2,582,482 to 2,583,393 _A2223 Rru_A2224: Rru_A2224 - Transcriptional Regulator, MarR family (NCBI), at 2,583,604 to 2,584,143 _A2224 Rru_A2225: Rru_A2225 - Two component Transcriptional regulator, Winged helix family (NCBI), at 2,584,140 to 2,584,880 _A2225
Group Condition Rru_A2221 Rru_A2222 Rru_A2223 Rru_A2224 Rru_A2225
light Succinic Acid; Light intensity 18 uM N.D. +0.1 +0.1 -3.0 N.D.
light acetate; Light intensity 38 uM N.D. +0.1 -0.4 -1.8 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. -0.1 +0.3 -2.0 N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. +0.0 -1.3 -0.5 N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. -0.2 -1.1 -0.1 N.D.
carbon source carbon source anaerobic Succinic Acid 31.25 mM N.D. -1.0 -0.5 +0.3 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light N.D. +0.0 +0.3 -1.5 N.D.
light acetate; Light intensity 18 uM N.D. +0.9 -0.3 -1.8 N.D.
light acetate; Light intensity 9 uM N.D. +0.1 +0.0 -1.1 N.D.
anaerboic nitrogen source Low light with ammonium chloride N.D. -0.1 +0.1 -0.9 N.D.
smn_rich SMN_rich N.D. -0.0 +0.1 -0.9 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. -0.2 +0.1 -0.5 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light N.D. -0.2 +0.2 -0.6 N.D.
light acetate; Light intensity 38 uM N.D. +0.5 -0.0 -0.9 N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. -0.0 -0.8 +0.5 N.D.
light acetate; Light intensity 75 uM N.D. +0.4 +0.4 -1.1 N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. +0.1 -1.0 +0.9 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light N.D. -0.5 +0.1 +0.7 N.D.
carbon source Hexanoic 21 mM; anaerobic N.D. +0.1 -0.5 +0.7 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. -0.1 -0.1 +0.6 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light N.D. -0.5 +0.1 +1.0 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. -0.2 -0.4 +1.2 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. -0.0 -0.2 +1.0 N.D.
light Succinic Acid; Light intensity 75 uM N.D. +0.1 -0.3 +0.9 N.D.
light Succinic Acid; Light intensity 9 uM N.D. +0.3 -0.1 +0.5 N.D.
light Succinic Acid; Light intensity 38 uM N.D. +0.1 -0.3 +1.0 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic N.D. -0.0 -0.5 +1.3 N.D.
light acetate; Light intensity 18 uM N.D. +0.0 +0.0 +1.0 N.D.
light Succinic Acid; Light intensity 75 uM N.D. +0.4 -0.5 +1.5 N.D.
light Succinic Acid; Light intensity 18 uM N.D. +0.1 -0.6 +4.0 N.D.
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