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Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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500 nt
Rru_A2145 and Rru_A2146 overlap by 4 nucleotides
Rru_A2146 and Rru_A2147 are separated by 91 nucleotides
Rru_A2147 and Rru_A2148 are separated by 274 nucleotides
Rru_A2148 and Rru_A2149 are separated by 707 nucleotides
Rru_A2145: Rru_A2145 - hypothetical protein (NCBI), at 2,489,203 to 2,489,571
_A2145
Rru_A2146: Rru_A2146 - chemotaxis sensory transducer (NCBI), at 2,489,568 to 2,491,025
_A2146
Rru_A2147: Rru_A2147 - Penicillin-binding protein 1A (NCBI), at 2,491,117 to 2,493,612
_A2147
Rru_A2148: Rru_A2148 - N-acetylmuramoyl-L-alanine amidase (NCBI), at 2,493,887 to 2,495,455
_A2148
Rru_A2149: Rru_A2149 - Ribonuclease E and G (NCBI), at 2,496,163 to 2,498,832
_A2149
Group
Condition
Rru
_A2145
Rru
_A2146
Rru
_A2147
Rru
_A2148
Rru
_A2149
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.8
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.5
N.D.
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.3
N.D.
N.D.
N.D.
carbon source
Succinate (C)_noKan
N.D.
-0.2
N.D.
N.D.
N.D.
anaerboic nitrogen source
Low light with N2
N.D.
-0.2
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.2
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
-0.1
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.1
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.1
N.D.
N.D.
N.D.
smn_rich
SMN_rich
N.D.
+0.1
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 9 uM
N.D.
+0.1
N.D.
N.D.
N.D.
light
acetate; Light intensity 38 uM
N.D.
+0.1
N.D.
N.D.
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.2
N.D.
N.D.
N.D.
smn_rich
SMN_rich_noKan
N.D.
+0.2
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.2
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.2
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 9 uM
N.D.
+0.3
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.3
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.4
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.4
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 75 uM
N.D.
+0.4
N.D.
N.D.
N.D.
light
acetate; Light intensity 18 uM
N.D.
+0.4
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.4
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.5
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.5
N.D.
N.D.
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.5
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.7
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.8
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
+1.1
N.D.
N.D.
N.D.
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