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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A2114 and Rru_A2115 are separated by 70 nucleotides
Rru_A2115 and Rru_A2116 are separated by 41 nucleotides
Rru_A2116 and Rru_A2117 are separated by 57 nucleotides
Rru_A2117 and Rru_A2118 are separated by 219 nucleotides
Rru_A2114: Rru_A2114 - O-antigen polymerase (NCBI), at 2,453,128 to 2,454,402
_A2114
Rru_A2115: Rru_A2115 - Phosphoglucomutase/phosphomannomutase (NCBI), at 2,454,473 to 2,456,107
_A2115
Rru_A2116: Rru_A2116 - UDP-glucose 6-dehydrogenase (NCBI), at 2,456,149 to 2,457,465
_A2116
Rru_A2117: Rru_A2117 - UTP--glucose-1-phosphate uridylyltransferase (NCBI), at 2,457,523 to 2,458,401
_A2117
Rru_A2118: Rru_A2118 - ATPase (NCBI), at 2,458,621 to 2,459,448
_A2118
Group
Condition
Rru
_A2114
Rru
_A2115
Rru
_A2116
Rru
_A2117
Rru
_A2118
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-2.7
N.D.
N.D.
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-2.7
N.D.
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-1.5
N.D.
N.D.
-0.6
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.3
N.D.
N.D.
+0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-1.8
N.D.
N.D.
-0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.0
N.D.
N.D.
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-2.0
N.D.
N.D.
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-1.8
N.D.
N.D.
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-1.1
N.D.
N.D.
-0.6
anaerboic nitrogen source
Low light with ammonium chloride
N.D.
-1.3
N.D.
N.D.
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-1.5
N.D.
N.D.
+0.0
carbon source
Valeric 25 mM; anaerobic
N.D.
-1.0
N.D.
N.D.
-0.0
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-1.1
N.D.
N.D.
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
-0.9
N.D.
N.D.
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.5
N.D.
N.D.
-0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
-0.8
N.D.
N.D.
-0.1
carbon source
Succinate (C)
N.D.
-0.7
N.D.
N.D.
-0.1
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.7
N.D.
N.D.
+0.3
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.9
N.D.
N.D.
-0.9
light
acetate; Light intensity 75 uM
N.D.
+0.9
N.D.
N.D.
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+1.0
N.D.
N.D.
-0.5
light
acetate; Light intensity 18 uM
N.D.
+0.9
N.D.
N.D.
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+1.4
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 75 uM
N.D.
+1.8
N.D.
N.D.
-0.4
light
acetate; Light intensity 38 uM
N.D.
+1.4
N.D.
N.D.
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+2.1
N.D.
N.D.
-0.3
light
Succinic Acid; Light intensity 150 uM
N.D.
+1.9
N.D.
N.D.
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+1.9
N.D.
N.D.
-0.0
light
Succinic Acid; Light intensity 150 uM
N.D.
+2.2
N.D.
N.D.
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+2.6
N.D.
N.D.
+0.2
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