Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2105 and Rru_A2106 are separated by 135 nucleotidesRru_A2106 and Rru_A2107 are separated by 227 nucleotidesRru_A2107 and Rru_A2108 are separated by 108 nucleotidesRru_A2108 and Rru_A2109 are separated by 178 nucleotides Rru_A2105: Rru_A2105 - inner-membrane translocator (NCBI), at 2,439,742 to 2,440,680 _A2105 Rru_A2106: Rru_A2106 - Protein of unknown function DUF534 (NCBI), at 2,440,816 to 2,441,787 _A2106 Rru_A2107: Rru_A2107 - 23S rRNA (uracil-5-)-methyltransferase RumA (NCBI), at 2,442,015 to 2,443,412 _A2107 Rru_A2108: Rru_A2108 - Multi-sensor Hybrid Histidine Kinase (NCBI), at 2,443,521 to 2,446,295 _A2108 Rru_A2109: Rru_A2109 - ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI), at 2,446,474 to 2,448,813 _A2109
Group Condition Rru_A2105 Rru_A2106 Rru_A2107 Rru_A2108 Rru_A2109
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.4 -0.5 N.D. +0.1 -0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.0 +0.0 N.D. +0.4 -1.5
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.6 -0.4 N.D. +0.0 -0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.2 +0.0 N.D. +0.4 -1.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.2 -0.1 N.D. +0.1 -0.7
carbon source Valeric 25 mM; anaerobic -0.3 +0.4 N.D. -0.1 -0.9
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.4 -0.2 N.D. +0.3 -0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.2 +0.1 N.D. -0.0 -0.6
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.3 -0.2 N.D. +0.1 -0.4
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.3 -0.2 N.D. +0.3 -0.4
carbon source Hexanoic 21 mM; anaerobic -0.3 +0.4 N.D. -0.3 -0.4
carbon source Valeric 25 mM; anaerobic -0.0 +0.1 N.D. +0.3 -0.8
light Succinic Acid; Light intensity 18 uM -0.4 +0.6 N.D. -0.6 +0.2
smn_rich SMN_rich_noKan +0.3 +0.1 N.D. -0.2 -0.4
smn_rich SMN_rich_noKan +0.3 +0.2 N.D. -0.1 -0.5
carbon source Succinic Acid 31.25 mM; anaerobic -0.2 -0.2 N.D. -0.1 +0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.2 -0.4 N.D. +0.4 -0.2
carbon source Succinic Acid 31.25 mM; anaerobic -0.5 +0.3 N.D. -0.0 +0.2
light Succinic Acid; Light intensity 18 uM +0.4 -0.6 N.D. +0.1 +0.1
carbon source Hexanoic 21 mM; anaerobic +0.1 +0.4 N.D. +0.1 -0.4
light acetate; Light intensity 18 uM +0.1 -0.3 N.D. -0.2 +0.6
carbon source Hexanoic 21 mM; anaerobic +0.4 +0.3 N.D. +0.3 -0.5
carbon source Hexanoic 21 mM; anaerobic +0.3 +0.4 N.D. -0.0 +0.3
light acetate; Light intensity 18 uM +0.2 +0.1 N.D. +0.2 +0.6
carbon source Hexanoic 21 mM; anaerobic +0.3 +0.4 N.D. +0.0 +0.5
light Succinic Acid; Light intensity 150 uM -0.1 -0.2 N.D. -0.1 +1.7
light acetate; Light intensity 75 uM +0.0 +0.1 N.D. -0.0 +1.2
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.4 -0.4 N.D. +0.8 +1.5
light acetate; Light intensity 38 uM -0.2 +0.0 N.D. -0.0 +1.9
light Succinic Acid; Light intensity 150 uM -0.0 -0.5 N.D. -0.5 +3.2
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