Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2088 and Rru_A2089 are separated by 11 nucleotidesRru_A2089 and Rru_A2090 overlap by 1 nucleotidesRru_A2090 and Rru_A2091 are separated by 256 nucleotidesRru_A2091 and Rru_A2092 are separated by 62 nucleotides Rru_A2088: Rru_A2088 - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI), at 2,416,789 to 2,417,520 _A2088 Rru_A2089: Rru_A2089 - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI), at 2,417,532 to 2,418,224 _A2089 Rru_A2090: Rru_A2090 - ABC transporter component (NCBI), at 2,418,224 to 2,418,967 _A2090 Rru_A2091: Rru_A2091 - hypothetical protein (NCBI), at 2,419,224 to 2,419,481 _A2091 Rru_A2092: Rru_A2092 - hypothetical protein (NCBI), at 2,419,544 to 2,419,960 _A2092
Group Condition Rru_A2088 Rru_A2089 Rru_A2090 Rru_A2091 Rru_A2092
light Succinic Acid; Light intensity 18 uM -0.1 -0.1 N.D. -2.4 N.D.
carbon source Hexanoic 21 mM; anaerobic -0.8 -1.0 N.D. -0.3 N.D.
carbon source Hexanoic 21 mM; anaerobic -1.1 -0.7 N.D. -0.3 N.D.
carbon source Hexanoic 21 mM; anaerobic -0.8 -0.9 N.D. -0.1 N.D.
carbon source Hexanoic 21 mM; anaerobic -0.7 -0.9 N.D. -0.0 N.D.
light acetate; Light intensity 9 uM -0.4 -0.6 N.D. -0.2 N.D.
smn_rich SMN_rich_noKan -0.3 -0.3 N.D. -0.5 N.D.
light acetate; Light intensity 18 uM -0.5 -0.6 N.D. +0.1 N.D.
light acetate; Light intensity 38 uM -0.4 -0.4 N.D. -0.1 N.D.
smn_rich SMN_rich_noKan -0.2 -0.2 N.D. -0.4 N.D.
light Succinic Acid; Light intensity 38 uM +0.2 +0.0 N.D. -1.1 N.D.
light Succinic Acid; Light intensity 75 uM -0.0 -0.3 N.D. -0.4 N.D.
smn_rich SMN_rich_noKan -0.1 -0.2 N.D. -0.4 N.D.
light acetate; Light intensity 75 uM -0.4 -0.1 N.D. -0.3 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.0 -0.3 N.D. -0.3 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.0 -0.3 N.D. -0.3 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.0 +0.3 N.D. -0.9 N.D.
carbon source Succinate (C)_noKan -0.0 +0.1 N.D. -0.4 N.D.
light Succinic Acid; Light intensity 9 uM +0.1 -0.0 N.D. -0.5 N.D.
carbon source Succinate (C)_noKan +0.0 +0.1 N.D. -0.4 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.0 -0.6 N.D. +0.3 N.D.
carbon source Succinate (C) +0.2 -0.0 N.D. -0.3 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.0 -0.5 N.D. +0.4 N.D.
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.2 +0.7 N.D. -0.6 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.1 -0.1 N.D. +0.4 N.D.
light Succinic Acid; Light intensity 75 uM +0.5 +0.8 N.D. -0.4 N.D.
light Succinic Acid; Light intensity 150 uM +0.2 +0.8 N.D. +0.0 N.D.
light Succinic Acid; Light intensity 150 uM +0.3 +1.2 N.D. -0.2 N.D.
light acetate; Light intensity 38 uM -0.4 +0.3 N.D. +1.6 N.D.
light Succinic Acid; Light intensity 18 uM +0.3 +0.2 N.D. +1.8 N.D.
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