Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2007 and Rru_A2008 are separated by 344 nucleotidesRru_A2008 and Rru_A2009 are separated by 124 nucleotidesRru_A2009 and Rru_A2010 are separated by 7 nucleotidesRru_A2010 and Rru_A2011 are separated by 7 nucleotides Rru_A2007: Rru_A2007 - Protein of unknown function DUF6, transmembrane (NCBI), at 2,318,681 to 2,319,718 _A2007 Rru_A2008: Rru_A2008 - Thiamine biosynthesis protein ThiC (NCBI), at 2,320,063 to 2,321,928 _A2008 Rru_A2009: Rru_A2009 - Glycerol kinase (NCBI), at 2,322,053 to 2,323,540 _A2009 Rru_A2010: Rru_A2010 - Aminotransferase, class V (NCBI), at 2,323,548 to 2,324,714 _A2010 Rru_A2011: Rru_A2011 - ABC transporter component (NCBI), at 2,324,722 to 2,326,404 _A2011
Group Condition Rru_A2007 Rru_A2008 Rru_A2009 Rru_A2010 Rru_A2011
carbon source Hexanoic 21 mM; anaerobic -0.2 -1.9 +0.2 -0.9 +0.3
carbon source Hexanoic 21 mM; anaerobic -0.1 -2.4 +0.5 -0.3 -0.1
carbon source Hexanoic 21 mM; anaerobic -0.1 -2.2 -0.0 -0.1 +0.0
carbon source Hexanoic 21 mM; anaerobic -0.2 -2.3 +0.5 +0.1 -0.1
carbon source Hexanoic 21 mM; anaerobic -0.1 -2.1 +0.5 +0.0 -0.2
light acetate; Light intensity 38 uM +0.2 -2.0 +0.1 +0.3 -0.0
carbon source Valeric 25 mM; anaerobic -0.2 -0.5 +0.1 -0.9 +0.2
light acetate; Light intensity 9 uM -0.0 -1.7 +0.5 +0.2 -0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.5 -0.5 -0.2 +0.4 -0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.5 -0.5 -0.3 +0.5 -0.0
carbon source Succinic Acid 31.25 mM; anaerobic -0.0 -0.1 +0.2 -0.8 +0.0
smn_rich SMN_rich_noKan +0.1 -1.0 +0.0 +0.1 -0.0
carbon source Succinate (C) +0.2 -0.7 +0.2 +0.1 -0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.2 -0.4 +0.5 -0.3 -0.1
carbon source Valeric 25 mM; anaerobic -0.1 -0.3 +0.3 +0.4 -0.1
light acetate; Light intensity 38 uM -0.2 -1.3 +1.2 +0.9 -0.2
light acetate; Light intensity 75 uM -0.0 -1.6 +2.0 +0.3 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.1 +0.2 -0.0 +0.8 -0.1
light Succinic Acid; Light intensity 150 uM +0.3 -0.1 -0.1 +0.7 +0.1
light Succinic Acid; Light intensity 18 uM +0.5 +0.0 +0.4 -0.4 +0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.2 +0.2 -0.0 +0.7 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 +0.5 +0.4 +0.2 -0.1
light Succinic Acid; Light intensity 18 uM -0.4 +0.2 +0.7 +0.9 -0.3
light Succinic Acid; Light intensity 150 uM -0.2 -0.5 -0.1 +1.8 +0.1
light Succinic Acid; Light intensity 9 uM +0.1 -0.1 +0.6 +0.4 +0.0
light Succinic Acid; Light intensity 75 uM +0.1 +0.9 +0.1 +0.3 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 +0.7 +0.2 +0.4 -0.2
light acetate; Light intensity 18 uM +0.3 -0.5 +1.1 +0.3 +0.2
light Succinic Acid; Light intensity 75 uM +0.1 +0.4 +0.4 +0.5 -0.1
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.2 -0.2 +2.7 +0.3 -1.1
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