Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A2003 and Rru_A2004 are separated by 159 nucleotidesRru_A2004 and Rru_A2005 are separated by 127 nucleotidesRru_A2005 and Rru_A2006 are separated by 12 nucleotidesRru_A2006 and Rru_A2007 are separated by 114 nucleotides Rru_A2003: Rru_A2003 - Radical SAM (NCBI), at 2,312,818 to 2,314,941 _A2003 Rru_A2004: Rru_A2004 - Transcriptional Regulator, LysR family (NCBI), at 2,315,101 to 2,316,015 _A2004 Rru_A2005: Rru_A2005 - Glutaryl-CoA dehydrogenase (NCBI), at 2,316,143 to 2,317,330 _A2005 Rru_A2006: Rru_A2006 - L-carnitine dehydratase/bile acid-inducible protein F (NCBI), at 2,317,343 to 2,318,566 _A2006 Rru_A2007: Rru_A2007 - Protein of unknown function DUF6, transmembrane (NCBI), at 2,318,681 to 2,319,718 _A2007
Group Condition Rru_A2003 Rru_A2004 Rru_A2005 Rru_A2006 Rru_A2007
carbon source Succinic Acid 31.25 mM; anaerobic -0.0 -1.7 -0.1 -0.0 +0.0
carbon source Valeric 25 mM; anaerobic +0.1 -1.4 -0.2 +0.1 -0.2
smn_rich SMN_rich -0.0 -0.6 -0.0 -0.1 -0.2
carbon source Hexanoic 21 mM; anaerobic +0.0 -0.4 -0.1 -0.2 -0.1
carbon source Hexanoic 21 mM; anaerobic +0.0 -0.8 +0.1 -0.1 -0.1
carbon source Valeric 25 mM; anaerobic +0.1 -1.0 +0.0 +0.2 -0.1
carbon source Succinate (C) +0.1 -1.0 +0.1 +0.1 +0.1
carbon source Valeric 25 mM; anaerobic +0.1 -0.1 -0.2 -0.3 -0.2
light Succinic Acid; Light intensity 18 uM +0.0 -0.3 -0.2 +0.3 -0.4
smn_rich SMN_rich +0.1 -0.6 -0.1 +0.0 +0.0
carbon source Succinic Acid 31.25 mM; anaerobic -0.2 -0.4 +0.0 +0.0 +0.2
carbon source Hexanoic 21 mM; anaerobic +0.1 -0.4 +0.3 -0.2 -0.2
light Succinic Acid; Light intensity 9 uM -0.1 -0.0 +0.2 -0.5 +0.1
light Succinic Acid; Light intensity 75 uM -0.2 +0.4 -0.0 -0.6 +0.1
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.1 +0.4 -0.0 -0.5 -0.2
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.1 -0.6 +0.1 -0.1 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.0 +0.6 -0.0 -0.0 -0.5
light Succinic Acid; Light intensity 18 uM -0.3 +0.3 +0.4 -0.7 +0.5
light acetate; Light intensity 38 uM -0.3 +2.1 -0.3 -1.0 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 +0.9 +0.0 -0.1 -0.5
light acetate; Light intensity 18 uM -0.1 +0.7 +0.2 -0.0 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.0 +0.6 +0.1 +0.0 +0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 +0.3 +0.3 +0.0 +0.2
light acetate; Light intensity 18 uM -0.1 +0.9 -0.1 -0.0 +0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.1 +0.7 +0.1 -0.0 +0.0
carbon source Hexanoic 21 mM; anaerobic +0.0 +1.1 +0.2 +0.1 -0.2
carbon source Valeric 25 mM; anaerobic +0.1 +1.1 +0.3 +0.2 -0.2
light acetate; Light intensity 75 uM -0.1 +1.6 +0.1 +0.1 -0.0
light Succinic Acid; Light intensity 150 uM -0.0 +2.8 -0.1 -0.3 +0.3
light Succinic Acid; Light intensity 150 uM -0.2 +4.2 -0.1 -0.6 -0.2
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