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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1992 and Rru_A1993 are separated by 24 nucleotides
Rru_A1993 and Rru_A1994 are separated by 14 nucleotides
Rru_A1994 and Rru_A1995 are separated by 84 nucleotides
Rru_A1995 and Rru_AR0037 are separated by 89 nucleotides
Rru_A1992: Rru_A1992 - Arsenate reductase (NCBI), at 2,303,016 to 2,303,435
_A1992
Rru_A1993: Rru_A1993 - hypothetical protein (NCBI), at 2,303,460 to 2,303,897
_A1993
Rru_A1994: Rru_A1994 - Transcriptional Regulator, MerR family (NCBI), at 2,303,912 to 2,304,319
_A1994
Rru_A1995: Rru_A1995 - Divalent cation transporter (NCBI), at 2,304,404 to 2,305,834
_A1995
Rru_AR0037: Rru_AR0037 - tRNA-Leu (NCBI), at 2,305,924 to 2,306,010
_AR0037
Group
Condition
Rru
_A1992
Rru
_A1993
Rru
_A1994
Rru
_A1995
Rru
_AR0037
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
-0.6
+0.4
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
+0.2
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
-0.6
+0.4
N.D.
carbon source
Succinate (C)_noKan
N.D.
N.D.
-0.3
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
-0.3
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
-0.2
+0.3
N.D.
light
acetate; Light intensity 18 uM
N.D.
N.D.
+0.3
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
-0.2
+0.4
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.4
-0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.3
+0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.2
+0.3
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.1
+0.6
N.D.
light
Succinic Acid; Light intensity 9 uM
N.D.
N.D.
+0.5
+0.1
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
-0.3
+0.9
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.1
+0.6
N.D.
light
Succinic Acid; Light intensity 38 uM
N.D.
N.D.
+0.2
+0.4
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
+0.6
+0.1
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
+0.3
+0.4
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.1
+0.7
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
+0.7
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
+0.7
+0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.8
+0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
+0.5
+0.6
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
+0.7
+0.4
N.D.
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
+0.6
+0.5
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
+0.4
+0.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
+0.9
+0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
+0.4
+0.8
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
+0.9
+0.3
N.D.
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
+1.2
+0.4
N.D.
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