Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1976 and Rru_A1977 are separated by 54 nucleotidesRru_A1977 and Rru_A1978 are separated by 3 nucleotidesRru_A1978 and Rru_A1979 are separated by 302 nucleotidesRru_A1979 and Rru_A1980 are separated by 159 nucleotides Rru_A1976: Rru_A1976 - Phenylacetate--CoA ligase (NCBI), at 2,286,031 to 2,287,344 _A1976 Rru_A1977: Rru_A1977 - Pyruvate ferredoxin/flavodoxin oxidoreductase (NCBI), at 2,287,399 to 2,288,016 _A1977 Rru_A1978: Rru_A1978 - indolepyruvate ferredoxin oxidoreductase (NCBI), at 2,288,020 to 2,289,882 _A1978 Rru_A1979: Rru_A1979 - Tryptophan synthase, beta chain-like (NCBI), at 2,290,185 to 2,291,543 _A1979 Rru_A1980: Rru_A1980 - Protein of unknown function DUF1022 (NCBI), at 2,291,703 to 2,292,707 _A1980
Group Condition Rru_A1976 Rru_A1977 Rru_A1978 Rru_A1979 Rru_A1980
carbon source Succinic Acid 31.25 mM; anaerobic -0.3 N.D. +0.1 -0.2 N.D.
carbon source Valeric 25 mM; anaerobic -0.2 N.D. +0.1 -0.3 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.2 N.D. -0.0 -0.1 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.2 N.D. +0.1 +0.1 N.D.
light Succinic Acid; Light intensity 38 uM +0.0 N.D. -0.2 +0.1 N.D.
carbon source Valeric 25 mM; anaerobic -0.0 N.D. +0.2 -0.1 N.D.
light acetate; Light intensity 9 uM +0.2 N.D. -0.1 -0.0 N.D.
carbon source Hexanoic 21 mM; anaerobic +0.1 N.D. +0.2 -0.2 N.D.
light Succinic Acid; Light intensity 75 uM +0.1 N.D. -0.1 +0.1 N.D.
light Succinic Acid; Light intensity 18 uM -0.1 N.D. +0.1 +0.1 N.D.
anaerboic nitrogen source SMN_rich_anaerobic -0.1 N.D. +0.1 +0.1 N.D.
carbon source Hexanoic 21 mM; anaerobic +0.1 N.D. +0.2 -0.1 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.2 N.D. -0.1 +0.1 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.0 N.D. +0.1 +0.1 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic -0.0 N.D. +0.2 +0.1 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.1 N.D. +0.3 +0.0 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 N.D. +0.2 +0.2 N.D.
light Succinic Acid; Light intensity 18 uM +0.3 N.D. -0.1 +0.1 N.D.
light acetate; Light intensity 38 uM -0.1 N.D. +0.1 +0.3 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.0 N.D. +0.1 +0.2 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.0 N.D. +0.1 +0.2 N.D.
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.2 N.D. +0.2 -0.1 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.1 N.D. +0.1 +0.1 N.D.
carbon source Hexanoic 21 mM; anaerobic +0.1 N.D. +0.1 +0.2 N.D.
light Succinic Acid; Light intensity 75 uM +0.2 N.D. +0.1 +0.1 N.D.
light Succinic Acid; Light intensity 9 uM +0.2 N.D. +0.0 +0.1 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.0 N.D. +0.2 +0.2 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.2 N.D. +0.2 +0.2 N.D.
light Succinic Acid; Light intensity 150 uM +0.2 N.D. +0.4 -0.1 N.D.
carbon source Valeric 25 mM; anaerobic +0.2 N.D. +0.2 +0.0 N.D.
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