Fitness for 5 genes in Rhodospirillum rubrum S1H

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntRru_A1952 and Rru_A1953 overlap by 4 nucleotidesRru_A1953 and Rru_A1954 overlap by 4 nucleotidesRru_A1954 and Rru_A1955 are separated by 191 nucleotidesRru_A1955 and Rru_A1956 overlap by 4 nucleotides Rru_A1952: Rru_A1952 - Fusaric acid resistance protein conserved region (NCBI), at 2,260,962 to 2,263,076 _A1952 Rru_A1953: Rru_A1953 - hypothetical protein (NCBI), at 2,263,073 to 2,263,282 _A1953 Rru_A1954: Rru_A1954 - Secretion protein HlyD (NCBI), at 2,263,279 to 2,264,181 _A1954 Rru_A1955: Rru_A1955 - Phosphoribosyltransferase (NCBI), at 2,264,373 to 2,264,927 _A1955 Rru_A1956: Rru_A1956 - Haloacid dehalogenase-like hydrolase (NCBI), at 2,264,924 to 2,265,610 _A1956
Group Condition Rru_A1952 Rru_A1953 Rru_A1954 Rru_A1955 Rru_A1956
carbon source Hexanoic 21 mM; anaerobic -0.1 +0.2 -0.0 -3.0 +0.5
light Succinic Acid; Light intensity 75 uM -0.2 -0.3 +0.1 -1.3 +0.1
carbon source Succinate (C)_noKan +0.0 -0.3 -0.1 -1.0 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 +0.4 +0.0 -2.2 +0.5
light acetate; Light intensity 38 uM +0.0 -0.7 +0.0 -0.7 +0.1
carbon source Valeric 25 mM; anaerobic -0.1 +0.2 +0.2 -1.6 +0.0
carbon source Hexanoic 21 mM; anaerobic +0.2 -0.3 -0.0 -0.7 -0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.1 -0.2 -0.1 -0.4 -0.3
carbon source Succinate (C)_noKan +0.0 -0.2 -0.1 -0.6 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.0 -0.5 -0.4 +0.6 -0.2
light Succinic Acid; Light intensity 150 uM -0.1 -0.7 +0.2 +0.3 -0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.0 -0.3 -0.5 +0.6 -0.1
light Succinic Acid; Light intensity 9 uM +0.0 -0.3 +0.2 -0.5 +0.3
anaerboic nitrogen source Low light with N2 +0.1 -0.4 -0.0 +0.5 -0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.3 -0.4 -0.1 +0.4 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic -0.2 +0.3 +0.0 -0.6 +0.6
carbon source Valeric 25 mM; anaerobic +0.1 +0.3 -0.3 +0.1 -0.2
carbon source Valeric 25 mM; anaerobic -0.2 +0.3 -0.1 -0.2 +0.3
light Succinic Acid; Light intensity 18 uM +0.3 +0.3 +0.4 -0.9 +0.1
carbon source Hexanoic 21 mM; anaerobic -0.2 +0.3 +0.1 -0.3 +0.3
carbon source Valeric 25 mM; anaerobic +0.0 +0.3 -0.1 +0.7 -0.3
light acetate; Light intensity 75 uM +0.1 -0.2 +0.2 +0.6 -0.0
light acetate; Light intensity 9 uM -0.0 +0.3 +0.1 +0.7 -0.1
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.5 -0.1 -0.3 +0.8 +0.3
light Succinic Acid; Light intensity 38 uM -0.0 +0.5 +0.1 +0.4 +0.1
light acetate; Light intensity 38 uM +0.1 +0.2 +0.2 +0.8 +0.1
light Succinic Acid; Light intensity 150 uM +0.3 -0.1 +0.0 +0.7 +0.3
carbon source Hexanoic 21 mM; anaerobic +0.1 +0.5 +0.1 +1.0 -0.4
light acetate; Light intensity 18 uM +0.3 -0.2 +0.7 +0.8 -0.0
light acetate; Light intensity 18 uM +0.2 +0.7 +0.4 +1.2 -0.3
remove
Rru_A1952
plot		 remove
Rru_A1953
plot		 remove
Rru_A1954		 remove
Rru_A1955
plot		 remove
Rru_A1956
plot