Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1939 and Rru_A1940 overlap by 4 nucleotidesRru_A1940 and Rru_A1941 overlap by 4 nucleotidesRru_A1941 and Rru_A1942 overlap by 19 nucleotidesRru_A1942 and Rru_A1943 are separated by 13 nucleotides Rru_A1939: Rru_A1939 - Pseudouridine synthase, Rsu (NCBI), at 2,246,881 to 2,247,480 _A1939 Rru_A1940: Rru_A1940 - Pyruvate carboxyltransferase (NCBI), at 2,247,477 to 2,248,391 _A1940 Rru_A1941: Rru_A1941 - acyl-CoA carboxylase alpha chain (NCBI), at 2,248,388 to 2,250,448 _A1941 Rru_A1942: Rru_A1942 - Enoyl-CoA hydratase/isomerase (NCBI), at 2,250,430 to 2,251,257 _A1942 Rru_A1943: Rru_A1943 - Propionyl-CoA carboxylase (NCBI), at 2,251,271 to 2,252,878 _A1943
Group Condition Rru_A1939 Rru_A1940 Rru_A1941 Rru_A1942 Rru_A1943
carbon source Hexanoic 21 mM; anaerobic -0.5 -0.2 -0.2 -0.5 -0.1
carbon source Valeric 25 mM; anaerobic -0.2 -0.4 -0.0 -0.5 +0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.0 -0.3 -0.5 -0.1 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.0 -0.3 -0.2 -0.1 -0.2
carbon source Hexanoic 21 mM; anaerobic -0.3 -0.1 -0.2 -0.1 -0.1
carbon source Hexanoic 21 mM; anaerobic -0.1 -0.4 +0.1 -0.6 +0.3
light Succinic Acid; Light intensity 18 uM +0.1 +0.2 -0.2 -0.6 -0.2
smn_rich SMN_rich_noKan +0.0 -0.1 -0.2 -0.2 -0.1
carbon source Succinate (C)_noKan +0.2 -0.2 -0.0 -0.4 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 -0.3 -0.2 -0.3 +0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.2 -0.0 -0.4 +0.2 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 +0.2 -0.2 -0.3 -0.1
carbon source Valeric 25 mM; anaerobic -0.1 +0.3 -0.3 -0.2 -0.0
carbon source Succinate (C)_noKan +0.1 -0.2 -0.2 +0.1 +0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.3 +0.3 -0.1 +0.1 -0.1
light Succinic Acid; Light intensity 75 uM -0.1 +0.4 -0.1 +0.0 -0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.1 -0.1 +0.4 -0.2 +0.2
carbon source Valeric 25 mM; anaerobic +0.2 +0.2 -0.3 +0.1 -0.0
carbon source Valeric 25 mM; anaerobic -0.3 +0.1 +0.2 +0.2 +0.0
light acetate; Light intensity 75 uM +0.1 -0.2 +0.4 +0.0 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; high light +0.2 +0.2 +0.2 -0.2 +0.0
light Succinic Acid; Light intensity 150 uM -0.3 +0.0 +0.7 -0.0 +0.2
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.5 -0.2 -0.0 +0.3 +0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.0 +0.1 -0.2 +0.6 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 +0.4 -0.2 +0.2 +0.2
light Succinic Acid; Light intensity 18 uM +0.2 +0.1 +0.2 +0.3 +0.1
light Succinic Acid; Light intensity 9 uM +0.2 +0.4 +0.2 +0.3 -0.1
light acetate; Light intensity 38 uM +0.4 +0.5 +0.4 +0.2 -0.1
light acetate; Light intensity 18 uM +0.3 +0.3 +0.4 +0.4 -0.0
light Succinic Acid; Light intensity 150 uM +1.0 +0.5 +0.4 -0.3 -0.0
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