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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1908 and Rru_A1909 are separated by 143 nucleotides
Rru_A1909 and Rru_A1910 are separated by 221 nucleotides
Rru_A1910 and Rru_A1911 are separated by 34 nucleotides
Rru_A1911 and Rru_A1912 are separated by 183 nucleotides
Rru_A1908: Rru_A1908 - Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI), at 2,211,932 to 2,213,491
_A1908
Rru_A1909: Rru_A1909 - hypothetical protein (NCBI), at 2,213,635 to 2,214,567
_A1909
Rru_A1910: Rru_A1910 - Cyclopropane-fatty-acyl-phospholipid synthase (NCBI), at 2,214,789 to 2,216,051
_A1910
Rru_A1911: Rru_A1911 - Ferric uptake regulator (FUR) family (NCBI), at 2,216,086 to 2,216,619
_A1911
Rru_A1912: Rru_A1912 - Short-chain dehydrogenase/reductase SDR (NCBI), at 2,216,803 to 2,217,549
_A1912
Group
Condition
Rru
_A1908
Rru
_A1909
Rru
_A1910
Rru
_A1911
Rru
_A1912
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
-0.4
-0.1
-1.1
+0.0
light
Succinic Acid; Light intensity 18 uM
-0.3
-0.2
-0.3
-0.8
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
-0.3
-0.0
-1.5
+0.4
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.0
-0.6
-0.6
-0.4
+0.3
light
acetate; Light intensity 75 uM
-0.3
-0.4
-0.1
-0.6
+0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.6
-0.1
-0.2
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.7
-0.0
-0.8
+0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.3
-0.6
-0.3
-0.4
-0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.3
-0.0
-0.8
+0.3
light
acetate; Light intensity 38 uM
-0.2
-1.0
-0.0
-0.0
+0.2
light
acetate; Light intensity 38 uM
+0.4
-0.3
-0.3
-1.0
+0.3
smn_rich
SMN_rich_noKan
+0.2
-0.2
-0.1
-0.2
-0.5
light
acetate; Light intensity 18 uM
-0.0
-0.9
+0.1
-0.4
+0.4
light
acetate; Light intensity 18 uM
+0.2
-0.5
-0.0
-0.2
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.6
-0.7
-0.2
-0.4
-0.0
light
Succinic Acid; Light intensity 9 uM
+0.3
-1.5
-0.2
-0.2
+0.9
light
Succinic Acid; Light intensity 9 uM
-0.0
-1.0
+0.0
+0.0
+0.3
light
Succinic Acid; Light intensity 18 uM
-0.1
-2.1
+0.0
+0.8
+0.7
light
acetate; Light intensity 9 uM
-0.1
-0.9
-0.1
-0.2
+0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
-0.0
-0.3
-0.7
+0.2
smn_rich
SMN_rich
-0.0
+0.3
-0.0
-0.2
-0.5
light
Succinic Acid; Light intensity 75 uM
-0.1
-0.8
-0.1
+0.1
+0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.1
-0.2
-0.0
-0.8
+0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.3
-0.1
-0.3
-0.6
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-0.2
-0.0
-0.8
+0.5
light
Succinic Acid; Light intensity 75 uM
+0.2
-1.0
-0.2
-0.5
+1.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.4
+0.2
-0.3
-0.8
+0.8
light
Succinic Acid; Light intensity 150 uM
+0.4
+0.7
+0.0
-0.7
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
+0.2
-0.0
-0.2
+1.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
+0.4
+0.1
-0.0
+0.8
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