Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1898 and Rru_A1899 are separated by 61 nucleotidesRru_A1899 and Rru_A1900 are separated by 137 nucleotidesRru_A1900 and Rru_A1901 are separated by 53 nucleotidesRru_A1901 and Rru_A1902 are separated by 295 nucleotides Rru_A1898: Rru_A1898 - SOS-response transcriptional repressor, LexA (NCBI), at 2,199,791 to 2,200,546 _A1898 Rru_A1899: Rru_A1899 - Nucleoside recognition (NCBI), at 2,200,608 to 2,201,576 _A1899 Rru_A1900: Rru_A1900 - Transcriptional Regulator, AsnC family (NCBI), at 2,201,714 to 2,202,184 _A1900 Rru_A1901: Rru_A1901 - chemotaxis sensory transducer (NCBI), at 2,202,238 to 2,204,298 _A1901 Rru_A1902: Rru_A1902 - Basic membrane lipoprotein (NCBI), at 2,204,594 to 2,205,673 _A1902
Group Condition Rru_A1898 Rru_A1899 Rru_A1900 Rru_A1901 Rru_A1902
carbon source Hexanoic 21 mM; anaerobic -6.8 -0.3 +0.1 -0.1 -0.0
carbon source Hexanoic 21 mM; anaerobic -1.4 -0.1 -1.2 +0.1 +0.1
carbon source Hexanoic 21 mM; anaerobic -1.7 +0.3 -1.1 +0.1 -0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.7 -0.0 -0.1 -0.5 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -2.2 +0.1 +0.1 +0.1 -0.2
light acetate; Light intensity 9 uM -2.5 +0.1 +0.2 -0.1 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic -0.9 -0.2 -0.6 -0.2 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -1.8 -0.0 +0.3 +0.1 -0.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.7 +0.1 -0.3 -0.5 +0.0
light Succinic Acid; Light intensity 9 uM -0.2 -0.2 -0.7 -0.3 +0.2
light Succinic Acid; Light intensity 150 uM +0.4 -0.3 -0.9 -0.2 +0.2
carbon source Succinate (C) -0.4 +0.1 -0.5 +0.1 +0.0
smn_rich SMN_rich_noKan -0.4 +0.1 -0.4 -0.1 +0.1
carbon source Valeric 25 mM; anaerobic -0.1 -0.1 -0.7 +0.1 +0.1
light acetate; Light intensity 38 uM -0.8 +0.2 -0.1 -0.0 +0.1
carbon source Valeric 25 mM; anaerobic -0.6 +0.1 +0.4 -0.4 +0.1
carbon source Hexanoic 21 mM; anaerobic -1.6 +0.0 +1.2 +0.2 +0.0
carbon source Hexanoic 21 mM; anaerobic -1.0 -0.1 +0.6 +0.3 +0.0
light Succinic Acid; Light intensity 18 uM -0.2 -0.0 +0.3 -0.5 +0.4
light Succinic Acid; Light intensity 75 uM +0.7 -0.2 -0.7 -0.0 +0.2
carbon source Valeric 25 mM; anaerobic -1.0 -0.2 +1.2 +0.2 -0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.5 +0.2 +0.2 +0.0 +0.1
carbon source Succinic Acid 31.25 mM; anaerobic +0.9 -0.1 -0.8 -0.2 +0.2
light acetate; Light intensity 18 uM -0.8 +0.2 +0.8 -0.1 +0.3
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.7 +0.1 -0.1 +0.1 -0.1
light Succinic Acid; Light intensity 75 uM +1.3 -0.1 +0.0 -0.5 +0.4
light Succinic Acid; Light intensity 150 uM +1.8 +0.0 -0.1 -0.5 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic +0.7 +0.1 +0.7 -0.1 +0.2
carbon source Succinic Acid 31.25 mM; anaerobic +0.5 +0.3 +0.6 +0.3 +0.1
carbon source carbon source anaerobic Succinic Acid 31.25 mM +1.0 +0.1 +0.7 -0.2 +0.1
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