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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1860 and Rru_A1861 are separated by 237 nucleotides
Rru_A1861 and Rru_A1862 are separated by 162 nucleotides
Rru_A1862 and Rru_A1863 are separated by 76 nucleotides
Rru_A1863 and Rru_A1864 are separated by 64 nucleotides
Rru_A1860: Rru_A1860 - Uracil-DNA glycosylase superfamily (NCBI), at 2,158,112 to 2,158,756
_A1860
Rru_A1861: Rru_A1861 - hypothetical protein (NCBI), at 2,158,994 to 2,159,905
_A1861
Rru_A1862: Rru_A1862 - hypothetical protein (NCBI), at 2,160,068 to 2,160,328
_A1862
Rru_A1863: Rru_A1863 - Glutathione peroxidase (NCBI), at 2,160,405 to 2,160,992
_A1863
Rru_A1864: Rru_A1864 - SmpB protein (NCBI), at 2,161,057 to 2,161,539
_A1864
Group
Condition
Rru
_A1860
Rru
_A1861
Rru
_A1862
Rru
_A1863
Rru
_A1864
light
acetate; Light intensity 18 uM
N.D.
-0.1
-1.3
-0.1
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.4
-0.1
-0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.4
+0.0
-0.3
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.3
-0.4
+0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.3
-0.3
-0.0
N.D.
light
acetate; Light intensity 38 uM
N.D.
-0.2
-0.3
-0.1
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.3
-0.4
-0.4
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.3
-0.1
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.1
-0.3
+0.0
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.7
+0.2
+0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.4
-0.0
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.2
-0.2
+0.2
N.D.
anaerboic nitrogen source
Low light with N2
N.D.
-0.0
-0.4
+0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.2
-0.0
+0.2
N.D.
anaerboic nitrogen source
Low light with ammonium chloride
N.D.
+0.1
-0.3
+0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.3
-0.0
+0.3
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.1
+0.3
-0.1
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.1
+0.1
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-0.1
+0.2
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-0.1
+0.1
+0.2
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.4
+0.0
-0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.5
+0.1
-0.3
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
-0.2
-0.1
+0.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.0
+0.4
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.0
+0.4
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
+0.1
+0.6
-0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.4
+0.1
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
+0.3
+0.4
+0.0
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.5
+0.5
-0.2
N.D.
light
acetate; Light intensity 38 uM
N.D.
+0.4
-0.0
+1.2
N.D.
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