Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1855 and Rru_A1856 are separated by 4 nucleotidesRru_A1856 and Rru_A1857 are separated by 155 nucleotidesRru_A1857 and Rru_A1858 are separated by 112 nucleotidesRru_A1858 and Rru_A1859 are separated by 144 nucleotides Rru_A1855: Rru_A1855 - hypothetical protein (NCBI), at 2,153,341 to 2,153,973 _A1855 Rru_A1856: Rru_A1856 - (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA (NCBI), at 2,153,978 to 2,156,125 _A1856 Rru_A1857: Rru_A1857 - RNA polymerase, omega subunit (NCBI), at 2,156,281 to 2,156,697 _A1857 Rru_A1858: Rru_A1858 - 7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (NCBI), at 2,156,810 to 2,157,295 _A1858 Rru_A1859: Rru_A1859 - Protein of unknown function DUF88 (NCBI), at 2,157,440 to 2,158,084 _A1859
Group Condition Rru_A1855 Rru_A1856 Rru_A1857 Rru_A1858 Rru_A1859
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -1.4 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -1.3 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.3 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.3 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.3 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.3 N.D. N.D. N.D. N.D.
light acetate; Light intensity 18 uM -1.1 N.D. N.D. N.D. N.D.
light acetate; Light intensity 38 uM -1.1 N.D. N.D. N.D. N.D.
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.9 N.D. N.D. N.D. N.D.
light acetate; Light intensity 9 uM -0.9 N.D. N.D. N.D. N.D.
light acetate; Light intensity 38 uM -0.8 N.D. N.D. N.D. N.D.
light acetate; Light intensity 75 uM -0.7 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.6 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.6 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.6 N.D. N.D. N.D. N.D.
carbon source Succinate (C) -0.5 N.D. N.D. N.D. N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.4 N.D. N.D. N.D. N.D.
carbon source Hexanoic 21 mM; anaerobic +0.4 N.D. N.D. N.D. N.D.
light Succinic Acid; Light intensity 18 uM +0.5 N.D. N.D. N.D. N.D.
carbon source Valeric 25 mM; anaerobic +0.5 N.D. N.D. N.D. N.D.
light Succinic Acid; Light intensity 18 uM +0.6 N.D. N.D. N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.7 N.D. N.D. N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.7 N.D. N.D. N.D. N.D.
light Succinic Acid; Light intensity 75 uM +1.0 N.D. N.D. N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +1.1 N.D. N.D. N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +1.2 N.D. N.D. N.D. N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +1.6 N.D. N.D. N.D. N.D.
light Succinic Acid; Light intensity 75 uM +1.7 N.D. N.D. N.D. N.D.
light Succinic Acid; Light intensity 150 uM +2.2 N.D. N.D. N.D. N.D.
light Succinic Acid; Light intensity 150 uM +2.3 N.D. N.D. N.D. N.D.
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