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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1616 and Rru_A1617 are separated by 335 nucleotides
Rru_A1617 and Rru_A1618 are separated by 65 nucleotides
Rru_A1618 and Rru_A1619 are separated by 88 nucleotides
Rru_A1619 and Rru_A1620 are separated by 209 nucleotides
Rru_A1616: Rru_A1616 - Pyridoxal-5'-phosphate-dependent enzyme, beta subunit (NCBI), at 1,909,415 to 1,910,398
_A1616
Rru_A1617: Rru_A1617 - Protein of unknown function DUF1289 (NCBI), at 1,910,734 to 1,911,645
_A1617
Rru_A1618: Rru_A1618 - hypothetical protein (NCBI), at 1,911,711 to 1,911,965
_A1618
Rru_A1619: Rru_A1619 - hypothetical protein (NCBI), at 1,912,054 to 1,912,578
_A1619
Rru_A1620: Rru_A1620 - hypothetical protein (NCBI), at 1,912,788 to 1,913,303
_A1620
Group
Condition
Rru
_A1616
Rru
_A1617
Rru
_A1618
Rru
_A1619
Rru
_A1620
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-1.2
+0.5
-0.1
-5.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-1.5
+0.4
+0.0
-5.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.2
-0.2
+0.1
-0.0
-5.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
-0.6
+0.1
+0.2
-4.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
+0.1
-0.1
-0.0
-4.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
-0.6
+0.1
+0.1
-3.5
carbon source
Valeric 25 mM; anaerobic
+0.2
-0.4
-0.2
-0.0
-3.1
carbon source
Valeric 25 mM; anaerobic
-0.3
-0.8
-0.2
+0.5
-2.7
smn_rich
SMN_rich_noKan
-0.2
+0.1
-0.1
+0.0
-3.2
carbon source
Valeric 25 mM; anaerobic
+0.0
-0.0
+0.1
-0.2
-3.3
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.7
-0.8
-2.5
+0.1
-0.8
carbon source
Hexanoic 21 mM; anaerobic
-0.0
-0.5
-0.1
+0.2
-2.7
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.7
-0.8
-0.1
+0.1
-3.0
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.3
-0.1
-0.1
-3.1
carbon source
Hexanoic 21 mM; anaerobic
-0.0
+0.0
-0.0
+0.0
-3.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.9
-1.3
-0.0
+0.2
-2.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.0
+0.2
+0.2
-0.0
-2.8
carbon source
Hexanoic 21 mM; anaerobic
+0.2
+0.3
+0.5
+0.0
-3.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.5
-0.9
+0.4
-0.3
-2.9
smn_rich
SMN_rich
+0.0
+0.4
+0.3
+0.0
-2.9
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.0
+0.6
+0.1
+0.1
-2.9
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.9
-1.0
-0.1
-0.1
-1.7
carbon source
Succinic Acid 31.25 mM; anaerobic
+1.2
-0.6
+0.2
+0.2
-3.0
carbon source
Succinate (C)
-0.2
+0.5
-0.1
+0.3
-2.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
+0.7
+0.8
+0.0
-2.3
light
acetate; Light intensity 18 uM
-0.1
+0.7
-0.6
-0.2
+1.5
light
Succinic Acid; Light intensity 75 uM
+2.6
-0.1
+0.1
-0.0
+0.4
light
Succinic Acid; Light intensity 150 uM
+0.7
+1.3
-0.8
-0.1
+2.8
light
Succinic Acid; Light intensity 150 uM
+0.6
+1.9
-0.8
+0.6
+4.1
light
acetate; Light intensity 38 uM
+0.1
+0.8
+4.4
+0.2
+2.1
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