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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1575 and Rru_A1576 are separated by 99 nucleotides
Rru_A1576 and Rru_A1577 are separated by 101 nucleotides
Rru_A1577 and Rru_A1578 overlap by 4 nucleotides
Rru_A1578 and Rru_A1579 overlap by 8 nucleotides
Rru_A1575: Rru_A1575 - hypothetical protein (NCBI), at 1,856,117 to 1,856,668
_A1575
Rru_A1576: Rru_A1576 - Prolyl-tRNA synthetase (NCBI), at 1,856,768 to 1,858,075
_A1576
Rru_A1577: Rru_A1577 - ThiJ/PfpI (NCBI), at 1,858,177 to 1,858,806
_A1577
Rru_A1578: Rru_A1578 - Lipoprotein releasing system, transmembrane protein, LolC/E family (NCBI), at 1,858,803 to 1,860,056
_A1578
Rru_A1579: Rru_A1579 - ABC transporter component (NCBI), at 1,860,049 to 1,860,807
_A1579
Group
Condition
Rru
_A1575
Rru
_A1576
Rru
_A1577
Rru
_A1578
Rru
_A1579
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.7
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.6
N.D.
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.4
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.4
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 38 uM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.3
N.D.
N.D.
N.D.
N.D.
light
acetate; Light intensity 18 uM
-0.3
N.D.
N.D.
N.D.
N.D.
light
acetate; Light intensity 38 uM
-0.3
N.D.
N.D.
N.D.
N.D.
light
acetate; Light intensity 9 uM
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Succinate (C)_noKan
-0.2
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
-0.2
N.D.
N.D.
N.D.
N.D.
smn_rich
SMN_rich
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
-0.2
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
SMN_rich_anaerobic
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Succinate (C)_noKan
-0.2
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
-0.2
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.2
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Succinate (C)_noKan
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.1
N.D.
N.D.
N.D.
N.D.
smn_rich
SMN_rich_noKan
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.5
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 18 uM
+0.6
N.D.
N.D.
N.D.
N.D.
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