Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1541 and Rru_A1542 are separated by 18 nucleotidesRru_A1542 and Rru_A1543 are separated by 8 nucleotidesRru_A1543 and Rru_A1544 are separated by 258 nucleotidesRru_A1544 and Rru_A1545 are separated by 36 nucleotides Rru_A1541: Rru_A1541 - Aminotransferase class-III (NCBI), at 1,814,272 to 1,815,615 _A1541 Rru_A1542: Rru_A1542 - Methylmalonate-semialdehyde dehydrogenase (NCBI), at 1,815,634 to 1,817,133 _A1542 Rru_A1543: Rru_A1543 - Putative molybdenum utilization protein ModD (NCBI), at 1,817,142 to 1,818,002 _A1543 Rru_A1544: Rru_A1544 - Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI), at 1,818,261 to 1,820,555 _A1544 Rru_A1545: Rru_A1545 - Putative diguanylate cyclase (GGDEF domain) (NCBI), at 1,820,592 to 1,821,230 _A1545
Group Condition Rru_A1541 Rru_A1542 Rru_A1543 Rru_A1544 Rru_A1545
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.2 -0.2 -0.7 +0.0 -3.2
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 -0.2 -1.4 +0.2 -0.4
carbon source Succinic Acid 31.25 mM; anaerobic -0.2 +0.0 +0.2 -0.0 -1.4
light Succinic Acid; Light intensity 75 uM -0.0 -0.2 -0.6 +0.1 -0.7
light acetate; Light intensity 75 uM +0.0 +0.1 +0.1 +0.2 -1.5
light Succinic Acid; Light intensity 18 uM -0.0 -0.2 +0.5 +0.0 -1.5
carbon source Valeric 25 mM; anaerobic -0.5 +0.2 +0.3 +0.1 -1.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.1 -0.1 -0.1 -0.1 -0.5
light Succinic Acid; Light intensity 9 uM +0.0 +0.0 -0.4 +0.1 -0.6
light Succinic Acid; Light intensity 38 uM +0.1 +0.0 -0.2 +0.1 -0.8
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.3 +0.0 -0.4 -0.0 +0.2
light Succinic Acid; Light intensity 18 uM -0.0 +0.1 -0.5 -0.1 +0.0
smn_rich SMN_rich +0.0 +0.1 -0.3 -0.1 -0.3
light acetate; Light intensity 18 uM -0.1 +0.4 +1.1 +0.1 -1.9
light Succinic Acid; Light intensity 150 uM +0.1 -0.1 +0.4 +0.1 -0.8
carbon source Hexanoic 21 mM; anaerobic -0.3 +0.2 +0.4 +0.1 -0.7
light acetate; Light intensity 9 uM +0.2 +0.2 +0.5 +0.2 -1.3
carbon source Succinic Acid 31.25 mM; anaerobic +0.2 -0.0 +0.2 +0.2 -0.2
carbon source Valeric 25 mM; anaerobic +0.0 -0.3 -0.0 +0.2 +0.5
light acetate; Light intensity 38 uM -0.3 +0.2 +0.2 -0.1 +0.4
carbon source Hexanoic 21 mM; anaerobic -0.0 -0.2 +0.1 +0.1 +0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.2 -0.3 -0.1 +0.0 +1.0
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 -0.2 -0.2 +0.0 +1.0
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.0 +0.0 -0.1 +0.1 +0.7
anaerboic nitrogen source Low light with ammonium chloride +0.1 +0.0 -0.0 -0.1 +0.8
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 +0.3 +0.2 +0.1 +0.2
carbon source Hexanoic 21 mM; anaerobic +0.1 +0.0 +0.4 +0.1 +0.4
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.1 +0.2 +0.0 +0.0 +0.8
carbon source Valeric 25 mM; anaerobic +0.2 +0.3 +0.2 +0.1 +0.4
carbon source Hexanoic 21 mM; anaerobic +0.2 +0.2 +0.2 +0.2 +0.8
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