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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1529 and Rru_A1530 overlap by 4 nucleotides
Rru_A1530 and Rru_A1531 overlap by 4 nucleotides
Rru_A1531 and Rru_A1532 are separated by 52 nucleotides
Rru_A1532 and Rru_A1533 are separated by 194 nucleotides
Rru_A1529: Rru_A1529 - Transcriptional Regulator, ArsR family (NCBI), at 1,799,672 to 1,800,685
_A1529
Rru_A1530: Rru_A1530 - 5,10-methylenetetrahydrofolate reductase (NCBI), at 1,800,682 to 1,801,641
_A1530
Rru_A1531: Rru_A1531 - 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI), at 1,801,638 to 1,805,186
_A1531
Rru_A1532: Rru_A1532 - TPR repeat (NCBI), at 1,805,239 to 1,806,150
_A1532
Rru_A1533: Rru_A1533 - Pentapeptide repeat (NCBI), at 1,806,345 to 1,806,890
_A1533
Group
Condition
Rru
_A1529
Rru
_A1530
Rru
_A1531
Rru
_A1532
Rru
_A1533
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.3
-5.4
N.D.
+0.3
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.4
-5.4
N.D.
+0.2
-0.2
carbon source
Succinate (C)
-1.5
-5.0
N.D.
-0.0
-0.0
carbon source
Succinate (C)
-1.4
-4.9
N.D.
-0.0
+0.0
carbon source
Succinate (C)
-1.3
-4.7
N.D.
-0.3
+0.1
carbon source
Succinate (C)_noKan
-1.7
-4.2
N.D.
-0.3
+0.0
carbon source
Succinate (C)_noKan
-1.6
-4.5
N.D.
-0.0
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-1.4
-4.1
N.D.
-0.1
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-1.5
-3.8
N.D.
-0.1
-0.2
carbon source
Succinate (C)_noKan
-1.5
-4.0
N.D.
+0.1
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.9
-3.5
N.D.
-0.4
-0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.6
-2.9
N.D.
-0.6
-0.8
carbon source
Valeric 25 mM; anaerobic
-1.1
-3.6
N.D.
+0.0
-0.2
light
acetate; Light intensity 18 uM
-0.7
-2.6
N.D.
-0.5
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-3.5
N.D.
-0.3
-0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.8
-2.5
N.D.
-0.6
-0.5
light
Succinic Acid; Light intensity 18 uM
-0.8
-2.3
N.D.
-0.8
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-1.0
-3.1
N.D.
-0.1
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.7
-1.7
N.D.
-1.2
-0.4
carbon source
Hexanoic 21 mM; anaerobic
-0.8
-2.6
N.D.
-0.3
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
-1.0
-2.3
N.D.
-0.1
-0.5
carbon source
Valeric 25 mM; anaerobic
-1.0
-3.2
N.D.
-0.2
+0.4
light
Succinic Acid; Light intensity 9 uM
-0.9
-2.9
N.D.
-0.1
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
-3.4
N.D.
+0.0
-0.0
light
Succinic Acid; Light intensity 75 uM
-0.7
-2.8
N.D.
-0.4
+0.1
light
Succinic Acid; Light intensity 38 uM
-0.8
-2.8
N.D.
-0.1
-0.2
light
acetate; Light intensity 9 uM
-0.8
-2.3
N.D.
-0.4
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.6
-2.0
N.D.
+0.1
-0.8
light
Succinic Acid; Light intensity 18 uM
-0.8
-2.8
N.D.
+0.4
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.8
-2.7
N.D.
+0.0
+0.2
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