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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1506 and Rru_A1507 are separated by 85 nucleotides
Rru_A1507 and Rru_A1508 are separated by 152 nucleotides
Rru_A1508 and Rru_A1509 are separated by 15 nucleotides
Rru_A1509 and Rru_A1510 are separated by 176 nucleotides
Rru_A1506: Rru_A1506 - hypothetical protein (NCBI), at 1,779,986 to 1,780,717
_A1506
Rru_A1507: Rru_A1507 - short-chain dehydrogenase/reductase SDR (NCBI), at 1,780,803 to 1,781,570
_A1507
Rru_A1508: Rru_A1508 - FAD dependent oxidoreductase (NCBI), at 1,781,723 to 1,783,369
_A1508
Rru_A1509: Rru_A1509 - hypothetical protein (NCBI), at 1,783,385 to 1,783,843
_A1509
Rru_A1510: Rru_A1510 - PRC-barrel (NCBI), at 1,784,020 to 1,784,673
_A1510
Group
Condition
Rru
_A1506
Rru
_A1507
Rru
_A1508
Rru
_A1509
Rru
_A1510
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.0
+0.4
-1.0
N.D.
-1.0
carbon source
Hexanoic 21 mM; anaerobic
-0.4
-0.5
-0.2
N.D.
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
-0.5
-0.4
N.D.
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
-0.6
-0.0
N.D.
-0.3
carbon source
Valeric 25 mM; anaerobic
+0.1
-0.7
-0.2
N.D.
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-0.3
-0.3
N.D.
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.2
-0.1
-0.2
N.D.
-0.4
smn_rich
SMN_rich
+0.1
+0.2
-0.1
N.D.
-0.6
light
Succinic Acid; Light intensity 18 uM
-0.2
+0.5
-0.2
N.D.
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.3
-0.3
+0.2
N.D.
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-0.3
+0.2
N.D.
-0.5
carbon source
Hexanoic 21 mM; anaerobic
+0.4
+0.1
-0.7
N.D.
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
+0.2
-0.2
N.D.
+0.4
carbon source
Hexanoic 21 mM; anaerobic
+0.2
+0.2
-0.1
N.D.
-0.4
light
Succinic Acid; Light intensity 150 uM
+0.3
-0.5
-0.1
N.D.
+0.3
light
Succinic Acid; Light intensity 9 uM
+0.3
+0.1
-0.0
N.D.
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
+0.1
+0.1
N.D.
-0.4
light
Succinic Acid; Light intensity 38 uM
+0.4
-0.1
+0.1
N.D.
-0.3
light
Succinic Acid; Light intensity 75 uM
+0.2
+0.4
-0.5
N.D.
+0.1
smn_rich
SMN_rich_noKan
-0.2
+0.2
-0.0
N.D.
+0.3
carbon source
Valeric 25 mM; anaerobic
+0.4
+0.0
+0.2
N.D.
-0.3
carbon source
Hexanoic 21 mM; anaerobic
+0.4
-0.0
-0.6
N.D.
+0.4
carbon source
Succinate (C)
+0.3
+0.3
-0.1
N.D.
-0.2
light
Succinic Acid; Light intensity 9 uM
+0.3
+0.5
-0.4
N.D.
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
+0.8
-0.3
N.D.
-0.1
light
acetate; Light intensity 18 uM
+0.2
+0.5
-0.1
N.D.
-0.0
light
Succinic Acid; Light intensity 18 uM
+0.5
+0.4
-0.2
N.D.
+0.0
light
acetate; Light intensity 18 uM
+0.3
+0.4
-0.0
N.D.
+0.3
light
acetate; Light intensity 38 uM
+0.1
+1.1
-0.5
N.D.
+0.3
light
acetate; Light intensity 75 uM
+0.4
+0.9
+0.1
N.D.
+0.3
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