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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1498 and Rru_A1499 overlap by 4 nucleotides
Rru_A1499 and Rru_A1500 are separated by 430 nucleotides
Rru_A1500 and Rru_A1501 are separated by 532 nucleotides
Rru_A1501 and Rru_A1502 are separated by 74 nucleotides
Rru_A1498: Rru_A1498 - hypothetical protein (NCBI), at 1,769,785 to 1,770,048
_A1498
Rru_A1499: Rru_A1499 - Ferritin and Dps (NCBI), at 1,770,045 to 1,770,608
_A1499
Rru_A1500: Rru_A1500 - Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI), at 1,771,039 to 1,775,490
_A1500
Rru_A1501: Rru_A1501 - Transport-associated (NCBI), at 1,776,023 to 1,776,337
_A1501
Rru_A1502: Rru_A1502 - hypothetical protein (NCBI), at 1,776,412 to 1,776,654
_A1502
Group
Condition
Rru
_A1498
Rru
_A1499
Rru
_A1500
Rru
_A1501
Rru
_A1502
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
+0.1
-0.9
N.D.
light
acetate; Light intensity 38 uM
N.D.
N.D.
-0.2
-0.5
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
-0.0
-0.6
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
-0.3
-0.3
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
+0.2
-0.7
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
-0.1
-0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.1
-0.1
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
-0.0
-0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.1
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
+0.0
-0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.1
-0.2
N.D.
smn_rich
SMN_rich
N.D.
N.D.
+0.1
-0.2
N.D.
smn_rich
SMN_rich_noKan
N.D.
N.D.
+0.0
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
+0.2
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
+0.2
-0.1
N.D.
light
acetate; Light intensity 9 uM
N.D.
N.D.
-0.0
+0.2
N.D.
anaerboic nitrogen source
SMN_rich_anaerobic
N.D.
N.D.
+0.1
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
+0.1
+0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.2
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.2
+0.1
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
+0.1
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
+0.3
+0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
+0.2
+0.1
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
-0.1
+0.4
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
+0.2
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
+0.1
+0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.3
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.2
+0.3
N.D.
light
acetate; Light intensity 18 uM
N.D.
N.D.
+0.1
+0.5
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.3
+0.3
N.D.
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