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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1494 and Rru_A1495 overlap by 4 nucleotides
Rru_A1495 and Rru_A1496 overlap by 4 nucleotides
Rru_A1496 and Rru_A1497 overlap by 4 nucleotides
Rru_A1497 and Rru_A1498 are separated by 8 nucleotides
Rru_A1494: Rru_A1494 - hypothetical protein (NCBI), at 1,764,386 to 1,765,768
_A1494
Rru_A1495: Rru_A1495 - hypothetical protein (NCBI), at 1,765,765 to 1,767,090
_A1495
Rru_A1496: Rru_A1496 - Glycosyl transferase, group 1 (NCBI), at 1,767,087 to 1,768,106
_A1496
Rru_A1497: Rru_A1497 - Cyclic peptide transporter (NCBI), at 1,768,103 to 1,769,776
_A1497
Rru_A1498: Rru_A1498 - hypothetical protein (NCBI), at 1,769,785 to 1,770,048
_A1498
Group
Condition
Rru
_A1494
Rru
_A1495
Rru
_A1496
Rru
_A1497
Rru
_A1498
light
Succinic Acid; Light intensity 18 uM
-0.5
-0.3
-0.2
-0.6
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
+0.0
-1.0
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.0
+0.1
-0.8
-0.3
N.D.
light
acetate; Light intensity 38 uM
-1.2
+0.4
+0.3
-0.5
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.6
+0.0
+0.5
-0.3
N.D.
light
Succinic Acid; Light intensity 75 uM
-0.6
+0.1
+0.5
-0.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-1.1
+0.3
+0.7
+0.0
N.D.
anaerboic nitrogen source
Low light with ammonium chloride
-0.4
+0.2
+0.4
+0.0
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.4
-0.1
+0.7
-0.0
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.7
+0.4
+0.7
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.2
+0.0
+0.3
+0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.3
+0.3
+0.6
-0.2
N.D.
light
Succinic Acid; Light intensity 150 uM
-0.3
+0.2
+0.3
+0.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.2
+0.7
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
+0.3
+0.3
+0.2
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.1
+0.1
+0.4
+0.3
N.D.
light
acetate; Light intensity 38 uM
-0.2
+0.2
+0.5
+0.2
N.D.
anaerboic nitrogen source
SMN_rich_anaerobic
-0.1
+0.4
+0.3
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
+0.4
+0.5
-0.0
N.D.
light
acetate; Light intensity 75 uM
-0.1
+0.3
+0.5
+0.1
N.D.
light
acetate; Light intensity 9 uM
-0.5
+0.3
+0.8
+0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
+0.3
+0.7
-0.1
N.D.
light
Succinic Acid; Light intensity 38 uM
+0.2
+0.1
+0.4
+0.3
N.D.
light
Succinic Acid; Light intensity 75 uM
-0.1
+0.2
+0.6
+0.4
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.7
+0.2
+1.2
+0.4
N.D.
light
acetate; Light intensity 18 uM
-0.6
+0.6
+1.0
+0.3
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.2
+0.5
+1.1
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
+1.1
+1.6
+0.5
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
+1.1
+1.7
+0.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.7
+1.2
+1.7
+0.5
N.D.
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Rru_A1496
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