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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1450 and Rru_A1451 are separated by 295 nucleotides
Rru_A1451 and Rru_A1452 are separated by 82 nucleotides
Rru_A1452 and Rru_A1453 are separated by 9 nucleotides
Rru_A1453 and Rru_A1454 are separated by 22 nucleotides
Rru_A1450: Rru_A1450 - Transcriptional Regulator, ArsR family (NCBI), at 1,715,068 to 1,716,021
_A1450
Rru_A1451: Rru_A1451 - hypothetical protein (NCBI), at 1,716,317 to 1,716,646
_A1451
Rru_A1452: Rru_A1452 - GCN5-related N-acetyltransferase (NCBI), at 1,716,729 to 1,717,361
_A1452
Rru_A1453: Rru_A1453 - Phage Tail Collar (NCBI), at 1,717,371 to 1,717,934
_A1453
Rru_A1454: Rru_A1454 - Phage Tail Collar (NCBI), at 1,717,957 to 1,718,493
_A1454
Group
Condition
Rru
_A1450
Rru
_A1451
Rru
_A1452
Rru
_A1453
Rru
_A1454
light
Succinic Acid; Light intensity 18 uM
-0.7
N.D.
-0.6
+0.1
-1.6
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.3
N.D.
+0.0
-0.4
-1.8
carbon source
Hexanoic 21 mM; anaerobic
-0.3
N.D.
-0.1
+0.1
-1.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.1
N.D.
+0.3
-0.7
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.9
N.D.
+0.4
-0.8
+0.1
smn_rich
SMN_rich_noKan
+0.2
N.D.
-0.2
-0.1
-0.7
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
N.D.
+0.2
+0.4
-1.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
N.D.
+0.3
-0.4
-0.6
light
Succinic Acid; Light intensity 75 uM
+0.2
N.D.
-0.1
-0.3
-0.2
carbon source
Succinate (C)_noKan
+0.2
N.D.
+0.0
-0.2
-0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.3
N.D.
+0.5
-0.3
-0.3
light
acetate; Light intensity 18 uM
+0.1
N.D.
+0.3
-0.4
-0.2
light
acetate; Light intensity 75 uM
-0.5
N.D.
+0.3
-0.1
+0.2
carbon source
Valeric 25 mM; anaerobic
+0.0
N.D.
+0.1
+0.3
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.4
N.D.
+0.1
+0.3
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.4
N.D.
-0.3
-0.0
+0.7
carbon source
Hexanoic 21 mM; anaerobic
+0.5
N.D.
+0.0
-0.3
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
N.D.
-0.1
-0.1
+0.6
carbon source
Valeric 25 mM; anaerobic
+0.3
N.D.
-0.2
-0.1
+0.2
light
acetate; Light intensity 18 uM
+0.3
N.D.
-0.0
+0.4
-0.4
carbon source
Hexanoic 21 mM; anaerobic
-0.0
N.D.
-0.2
-0.2
+0.7
carbon source
Hexanoic 21 mM; anaerobic
+0.1
N.D.
-0.3
-0.2
+0.9
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.6
N.D.
-0.3
-0.0
+0.3
anaerboic nitrogen source
Low light with ammonium chloride
-0.1
N.D.
+0.0
-0.1
+0.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.1
N.D.
-0.1
+0.1
+0.6
light
Succinic Acid; Light intensity 9 uM
+0.2
N.D.
+0.1
-0.1
+0.6
carbon source
Succinate (C)
+0.0
N.D.
+0.1
-0.1
+1.0
light
Succinic Acid; Light intensity 18 uM
+0.8
N.D.
+0.4
-0.3
+1.0
light
Succinic Acid; Light intensity 150 uM
+0.8
N.D.
+0.2
-0.7
+2.2
light
acetate; Light intensity 38 uM
+1.7
N.D.
+0.8
-0.1
+1.0
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