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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1390 and Rru_A1391 overlap by 4 nucleotides
Rru_A1391 and Rru_A1392 are separated by 88 nucleotides
Rru_A1392 and Rru_A1393 are separated by 11 nucleotides
Rru_A1393 and Rru_A1394 are separated by 14 nucleotides
Rru_A1390: Rru_A1390 - hypothetical protein (NCBI), at 1,641,922 to 1,642,479
_A1390
Rru_A1391: Rru_A1391 - hypothetical protein (NCBI), at 1,642,476 to 1,643,198
_A1391
Rru_A1392: Rru_A1392 - Nitrogenase (NCBI), at 1,643,287 to 1,644,675
_A1392
Rru_A1393: Rru_A1393 - Nitrogenase (NCBI), at 1,644,687 to 1,645,037
_A1393
Rru_A1394: Rru_A1394 - nitrogenase iron-iron protein, alpha chain (NCBI), at 1,645,052 to 1,646,611
_A1394
Group
Condition
Rru
_A1390
Rru
_A1391
Rru
_A1392
Rru
_A1393
Rru
_A1394
light
Succinic Acid; Light intensity 75 uM
+0.1
-0.4
-0.5
-1.1
+0.1
light
acetate; Light intensity 38 uM
+0.0
-0.4
-0.2
-0.6
-0.1
light
Succinic Acid; Light intensity 9 uM
+0.0
-0.2
-0.2
-1.1
+0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.4
+0.6
-1.5
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.1
-0.6
-0.0
-0.8
+0.1
smn_rich
SMN_rich
-0.1
-0.3
-0.1
-0.7
+0.1
smn_rich
SMN_rich_noKan
-0.0
+0.4
-0.1
-1.1
-0.0
light
acetate; Light intensity 9 uM
+0.1
-0.3
-0.1
-0.5
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.2
-0.6
+0.1
-0.5
-0.0
light
Succinic Acid; Light intensity 38 uM
+0.1
+0.0
-0.1
-0.9
+0.0
carbon source
Hexanoic 21 mM; anaerobic
-0.0
-0.4
-0.5
+0.4
-0.1
light
Succinic Acid; Light intensity 150 uM
+0.2
+0.1
-0.1
-0.8
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.3
-1.0
-0.2
+0.1
+0.4
carbon source
Hexanoic 21 mM; anaerobic
+0.4
-0.3
+0.5
-0.9
+0.1
carbon source
Valeric 25 mM; anaerobic
+0.1
+0.3
+0.2
-0.9
-0.0
carbon source
Valeric 25 mM; anaerobic
-0.1
-0.7
-0.5
+1.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
-0.9
-0.1
+0.0
+0.5
carbon source
Valeric 25 mM; anaerobic
+0.1
+0.4
+0.2
-1.0
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-1.0
+0.1
+0.6
+0.1
light
Succinic Acid; Light intensity 75 uM
-0.1
+0.5
-0.3
+0.2
-0.1
light
acetate; Light intensity 18 uM
+0.0
+1.0
-0.1
-0.8
+0.0
carbon source
Hexanoic 21 mM; anaerobic
+0.2
+0.5
+0.2
-0.8
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.0
-0.2
+0.1
+0.8
-0.1
light
acetate; Light intensity 38 uM
-0.2
+0.8
-0.1
+0.3
-0.3
light
Succinic Acid; Light intensity 18 uM
+0.4
+0.2
+0.2
-0.3
+0.2
light
Succinic Acid; Light intensity 150 uM
-0.3
+1.4
-0.5
+0.3
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.4
-0.0
+0.5
+0.0
+0.2
light
Succinic Acid; Light intensity 9 uM
-0.0
+0.6
-0.1
+0.9
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.6
+0.3
+0.9
+0.2
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.6
+0.6
+0.8
+0.1
+0.3
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