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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1369 and Rru_A1370 are separated by 67 nucleotides
Rru_A1370 and Rru_A1371 are separated by 21 nucleotides
Rru_A1371 and Rru_A1372 overlap by 4 nucleotides
Rru_A1372 and Rru_A1373 are separated by 6 nucleotides
Rru_A1369: Rru_A1369 - hypothetical protein (NCBI), at 1,611,725 to 1,614,103
_A1369
Rru_A1370: Rru_A1370 - hypothetical protein (NCBI), at 1,614,171 to 1,614,836
_A1370
Rru_A1371: Rru_A1371 - hypothetical protein (NCBI), at 1,614,858 to 1,615,130
_A1371
Rru_A1372: Rru_A1372 - hypothetical protein (NCBI), at 1,615,127 to 1,615,981
_A1372
Rru_A1373: Rru_A1373 - Peptidase C14, caspase catalytic subunit p20 (NCBI), at 1,615,988 to 1,616,905
_A1373
Group
Condition
Rru
_A1369
Rru
_A1370
Rru
_A1371
Rru
_A1372
Rru
_A1373
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.2
-0.9
-0.6
+0.0
-1.3
light
Succinic Acid; Light intensity 150 uM
+0.0
-0.1
-0.5
-0.4
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.5
-0.2
-0.1
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.2
-0.4
-0.0
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.0
-0.0
+0.2
-0.6
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
-0.4
-0.4
+0.3
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.5
+0.0
+0.2
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.1
+0.5
-0.4
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.2
-0.5
+0.0
+0.3
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.1
+0.1
+0.7
-0.5
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
-0.5
-0.1
+0.1
+0.4
light
Succinic Acid; Light intensity 18 uM
+0.1
-0.7
+0.6
-0.0
+0.2
light
acetate; Light intensity 9 uM
+0.0
+0.1
-0.1
-0.2
+0.4
carbon source
Succinate (C)
-0.0
-0.1
+0.3
-0.2
+0.3
light
Succinic Acid; Light intensity 75 uM
+0.0
-0.4
+0.8
-0.2
-0.0
light
acetate; Light intensity 18 uM
+0.1
+0.2
+0.4
-0.3
-0.2
light
Succinic Acid; Light intensity 150 uM
-0.1
-0.0
+1.0
-0.3
-0.3
carbon source
Hexanoic 21 mM; anaerobic
+0.2
-0.0
-0.1
+0.3
+0.2
light
acetate; Light intensity 38 uM
+0.4
-0.9
+0.8
+0.3
-0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.3
-0.0
-0.1
+0.3
+0.2
light
Succinic Acid; Light intensity 9 uM
+0.1
-0.2
+1.0
-0.1
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.2
+0.1
+0.3
+0.3
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.3
+0.1
-0.1
+0.1
+0.5
light
Succinic Acid; Light intensity 18 uM
+0.0
+0.3
+0.6
-0.0
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
-0.2
+0.8
+0.3
+0.0
carbon source
Valeric 25 mM; anaerobic
+0.1
+0.0
+0.2
+0.4
+0.4
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.4
+0.7
-0.0
+0.1
+0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.3
+0.6
+0.0
+0.3
+0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.5
+0.7
+0.2
+0.1
+0.9
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.4
+0.6
+0.1
+0.3
+1.1
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