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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
11723623 and Rru_A1343 are separated by 284 nucleotides
Rru_A1343 and Rru_A1344 are separated by 140 nucleotides
Rru_A1344 and Rru_A1345 are separated by 140 nucleotides
Rru_A1345 and Rru_A1346 are separated by 23 nucleotides
11723623 - no description, at 1,581,933 to 1,581,961
11723623
Rru_A1343: Rru_A1343 - hypothetical protein (NCBI), at 1,582,246 to 1,583,757
_A1343
Rru_A1344: Rru_A1344 - Transcriptional Regulator, IclR family (NCBI), at 1,583,898 to 1,584,686
_A1344
Rru_A1345: Rru_A1345 - hypothetical protein (NCBI), at 1,584,827 to 1,585,681
_A1345
Rru_A1346: Rru_A1346 - Pentulose kinase (NCBI), at 1,585,705 to 1,587,285
_A1346
Group
Condition
11723623
Rru
_A1343
Rru
_A1344
Rru
_A1345
Rru
_A1346
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.4
-0.9
+0.1
+0.2
light
acetate; Light intensity 9 uM
N.D.
+0.0
-0.4
-0.0
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.0
-0.1
-0.5
-0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
-0.0
-0.3
-0.1
-0.2
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.3
-0.4
-0.6
+0.1
light
acetate; Light intensity 18 uM
N.D.
+0.1
-0.2
-0.1
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.3
-0.0
-0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.1
+0.1
-0.2
-0.2
light
Succinic Acid; Light intensity 75 uM
N.D.
-0.1
-0.3
+0.2
-0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.1
+0.0
-0.3
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.1
-0.3
+0.1
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.3
+0.3
+0.0
-0.1
smn_rich
SMN_rich
N.D.
-0.3
+0.1
-0.0
+0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.2
-0.1
+0.3
+0.1
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.1
+0.4
-0.2
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.0
-0.2
+0.1
+0.1
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.2
-0.2
+0.2
+0.3
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.2
-0.2
+0.2
+0.4
light
Succinic Acid; Light intensity 38 uM
N.D.
-0.0
+0.4
+0.2
-0.3
light
Succinic Acid; Light intensity 150 uM
N.D.
-0.2
+0.1
+0.1
+0.2
light
Succinic Acid; Light intensity 9 uM
N.D.
+0.1
+0.3
+0.2
-0.1
carbon source
Succinate (C)
N.D.
-0.0
+0.0
+0.2
+0.2
carbon source
Succinate (C)_noKan
N.D.
+0.1
+0.1
+0.1
+0.2
smn_rich
SMN_rich
N.D.
+0.1
+0.1
+0.0
+0.3
light
acetate; Light intensity 18 uM
N.D.
-0.0
+0.1
+0.1
+0.3
light
Succinic Acid; Light intensity 150 uM
N.D.
+0.1
+0.2
+0.3
+0.1
carbon source
Succinate (C)
N.D.
+0.2
+0.1
+0.2
+0.3
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.3
-0.2
+0.6
+0.2
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.4
+0.6
+0.6
-0.5
light
acetate; Light intensity 38 uM
N.D.
+0.7
-0.0
+0.7
-0.3
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