Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 60 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Rru_A1335 and Rru_A1336 are separated by 62 nucleotides
Rru_A1336 and Rru_A1337 are separated by 168 nucleotides
Rru_A1337 and Rru_A1338 overlap by 4 nucleotides
Rru_A1338 and Rru_A1339 are separated by 17 nucleotides
Rru_A1335: Rru_A1335 - inner-membrane translocator (NCBI), at 1,571,352 to 1,572,413
_A1335
Rru_A1336: Rru_A1336 - Periplasmic binding protein/LacI transcriptional regulator (NCBI), at 1,572,476 to 1,573,477
_A1336
Rru_A1337: Rru_A1337 - ABC transporter component (NCBI), at 1,573,646 to 1,575,229
_A1337
Rru_A1338: Rru_A1338 - inner-membrane translocator (NCBI), at 1,575,226 to 1,576,257
_A1338
Rru_A1339: Rru_A1339 - Transcriptional Regulator, DeoR family (NCBI), at 1,576,275 to 1,577,366
_A1339
Group
Condition
Rru
_A1335
Rru
_A1336
Rru
_A1337
Rru
_A1338
Rru
_A1339
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.5
-1.2
-0.2
-0.8
-0.8
light
Succinic Acid; Light intensity 18 uM
-0.3
-0.8
-1.0
-0.4
-0.8
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
-0.3
-0.4
-0.7
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.2
-0.3
-0.4
-0.6
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
+0.1
-0.1
-0.1
-1.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
+0.0
+0.2
-0.1
-1.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.0
-0.5
-0.2
-0.1
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-0.1
+0.2
+0.0
-1.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
-0.3
-0.6
+0.1
-0.2
carbon source
Valeric 25 mM; anaerobic
-0.4
-0.1
-0.2
+0.2
-0.5
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
-0.5
-0.3
-0.1
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
-0.2
+0.4
+0.1
-1.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.0
-0.3
-0.2
-0.1
-0.1
anaerboic nitrogen source
Low light with ammonium chloride
-0.2
+0.1
-0.5
-0.0
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
+0.0
-0.4
-0.0
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.1
-0.2
+0.1
-0.6
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.2
-0.3
-0.1
+0.2
light
acetate; Light intensity 38 uM
-0.1
+0.2
-0.1
+0.1
-0.4
carbon source
Succinate (C)
+0.2
-0.1
+0.2
-0.1
-0.3
light
Succinic Acid; Light intensity 150 uM
-0.2
-0.5
-0.4
-0.1
+1.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
+0.0
+0.5
-0.1
-0.1
light
acetate; Light intensity 75 uM
+0.0
+0.2
-0.3
+0.1
+0.6
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
+0.2
-0.1
+0.0
+0.3
light
acetate; Light intensity 18 uM
+0.3
+0.5
-0.0
+0.0
-0.2
light
Succinic Acid; Light intensity 150 uM
-0.1
+0.1
-0.4
+0.1
+1.1
light
acetate; Light intensity 18 uM
-0.1
+0.2
-0.4
+0.3
+0.7
light
Succinic Acid; Light intensity 75 uM
+0.3
+0.2
+0.4
+0.2
-0.0
light
Succinic Acid; Light intensity 9 uM
+0.4
+0.5
+0.5
+0.2
-0.1
light
acetate; Light intensity 38 uM
+0.2
+0.2
+0.5
+0.0
+0.5
light
Succinic Acid; Light intensity 18 uM
+0.5
+0.9
+1.3
+0.8
+0.6
remove
Rru_A1335
plot
remove
Rru_A1336
plot
remove
Rru_A1337
remove
Rru_A1338
plot
remove
Rru_A1339
plot