Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1333 and Rru_A1334 are separated by 222 nucleotidesRru_A1334 and Rru_A1335 are separated by 550 nucleotidesRru_A1335 and Rru_A1336 are separated by 62 nucleotidesRru_A1336 and Rru_A1337 are separated by 168 nucleotides Rru_A1333: Rru_A1333 - BioY protein (NCBI), at 1,569,698 to 1,570,132 _A1333 Rru_A1334: Rru_A1334 - Ribose 5-phosphate isomerase B (NCBI), at 1,570,355 to 1,570,801 _A1334 Rru_A1335: Rru_A1335 - inner-membrane translocator (NCBI), at 1,571,352 to 1,572,413 _A1335 Rru_A1336: Rru_A1336 - Periplasmic binding protein/LacI transcriptional regulator (NCBI), at 1,572,476 to 1,573,477 _A1336 Rru_A1337: Rru_A1337 - ABC transporter component (NCBI), at 1,573,646 to 1,575,229 _A1337
Group Condition Rru_A1333 Rru_A1334 Rru_A1335 Rru_A1336 Rru_A1337
carbon source Hexanoic 21 mM; anaerobic +0.1 -1.6 -0.1 +0.1 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.5 -1.1 -0.1 +0.1 -0.1
carbon source Succinic Acid 31.25 mM; anaerobic +0.3 -0.7 -0.0 -0.3 -0.6
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.0 -0.4 -0.2 -0.3 -0.4
carbon source Succinic Acid 31.25 mM; anaerobic -1.0 -0.8 +0.0 +0.0 +0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.0 -0.2 -0.3 -0.3 -0.4
light Succinic Acid; Light intensity 18 uM +0.9 +0.1 -0.3 -0.8 -1.0
light Succinic Acid; Light intensity 150 uM -0.4 -0.3 -0.1 +0.1 -0.4
light acetate; Light intensity 75 uM -1.1 +0.1 +0.0 +0.2 -0.3
light Succinic Acid; Light intensity 75 uM -1.1 -0.2 -0.0 -0.0 +0.1
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.1 -0.5 -0.0 -0.5 -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.2 -0.5 +0.0 -0.5 -0.3
anaerboic nitrogen source Low light with ammonium chloride -0.1 -0.3 -0.2 +0.1 -0.5
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.2 -0.6 -0.1 -0.1 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.3 -0.6 -0.1 +0.0 +0.2
smn_rich SMN_rich -0.8 -0.2 +0.1 -0.1 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.4 -0.5 -0.1 -0.2 +0.4
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.9 +0.4 -0.5 -1.2 -0.2
light acetate; Light intensity 38 uM -1.7 +0.1 +0.2 +0.2 +0.5
light Succinic Acid; Light intensity 75 uM -1.2 -0.3 +0.3 +0.2 +0.4
light acetate; Light intensity 18 uM +0.3 -0.5 -0.1 +0.2 -0.4
light acetate; Light intensity 38 uM -0.7 +0.3 -0.1 +0.2 -0.1
carbon source Valeric 25 mM; anaerobic +0.8 -0.5 -0.4 -0.1 -0.2
light Succinic Acid; Light intensity 150 uM +0.3 +0.5 -0.2 -0.5 -0.4
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light +0.8 -0.6 +0.0 +0.1 -0.1
carbon source Hexanoic 21 mM; anaerobic +0.5 +0.3 +0.1 -0.2 -0.3
carbon source Succinic Acid 31.25 mM; anaerobic +0.2 +0.6 +0.2 +0.0 -0.2
light acetate; Light intensity 18 uM -0.7 +0.9 +0.3 +0.5 -0.0
light Succinic Acid; Light intensity 9 uM -0.2 +0.1 +0.4 +0.5 +0.5
light Succinic Acid; Light intensity 18 uM -1.0 -0.1 +0.5 +0.9 +1.3
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