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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1260 and Rru_A1261 are separated by 85 nucleotides
Rru_A1261 and Rru_A1262 overlap by 4 nucleotides
Rru_A1262 and Rru_A1263 are separated by 42 nucleotides
Rru_A1263 and Rru_A1264 are separated by 104 nucleotides
Rru_A1260: Rru_A1260 - ABC transporter component (NCBI), at 1,480,963 to 1,482,081
_A1260
Rru_A1261: Rru_A1261 - Binding-protein-dependent transport systems inner membrane component (NCBI), at 1,482,167 to 1,483,063
_A1261
Rru_A1262: Rru_A1262 - extracellular solute-binding protein, family 1 (NCBI), at 1,483,060 to 1,484,334
_A1262
Rru_A1263: Rru_A1263 - Binding-protein-dependent transport systems inner membrane component (NCBI), at 1,484,377 to 1,485,186
_A1263
Rru_A1264: Rru_A1264 - Short-chain dehydrogenase/reductase SDR (NCBI), at 1,485,291 to 1,486,073
_A1264
Group
Condition
Rru
_A1260
Rru
_A1261
Rru
_A1262
Rru
_A1263
Rru
_A1264
light
Succinic Acid; Light intensity 18 uM
-0.9
-0.6
-0.2
-0.3
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.0
-0.1
+0.0
-0.2
-0.7
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.3
-0.6
-0.3
-0.0
+0.4
light
Succinic Acid; Light intensity 75 uM
+0.1
-0.1
-0.1
+0.0
-0.7
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.1
-0.1
-0.2
-0.4
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.2
-0.3
-0.4
-0.3
+0.4
carbon source
Hexanoic 21 mM; anaerobic
+0.1
-0.2
-0.1
-0.2
-0.3
light
Succinic Acid; Light intensity 9 uM
-0.0
-0.1
-0.0
-0.2
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.4
+0.2
+0.0
-0.4
-0.0
light
Succinic Acid; Light intensity 9 uM
-0.2
-0.1
-0.0
+0.1
-0.3
light
acetate; Light intensity 75 uM
+0.0
-0.2
+0.0
-0.1
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.3
-0.4
-0.1
+0.4
light
Succinic Acid; Light intensity 75 uM
-0.2
-0.3
-0.1
-0.0
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.4
+0.1
+0.1
+0.3
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
+0.0
+0.1
-0.1
-0.4
carbon source
Valeric 25 mM; anaerobic
-0.0
+0.1
-0.3
-0.3
+0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.2
-0.2
-0.1
-0.2
+0.0
light
acetate; Light intensity 38 uM
+0.3
-0.3
-0.2
-0.1
+0.2
carbon source
Hexanoic 21 mM; anaerobic
-0.3
+0.1
+0.2
-0.1
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.4
+0.1
+0.1
-0.1
+0.3
light
Succinic Acid; Light intensity 150 uM
-0.1
-0.2
-0.2
-0.0
+0.4
carbon source
Hexanoic 21 mM; anaerobic
+0.0
-0.1
+0.0
+0.3
-0.3
carbon source
Hexanoic 21 mM; anaerobic
-0.1
+0.2
+0.1
+0.1
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.2
-0.2
-0.1
-0.1
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
+0.3
-0.0
-0.2
+0.4
light
acetate; Light intensity 18 uM
+0.3
+0.1
-0.1
-0.1
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
+0.3
-0.1
-0.0
+0.4
carbon source
Valeric 25 mM; anaerobic
-0.1
+0.1
+0.1
+0.4
+0.1
light
acetate; Light intensity 18 uM
+0.1
+0.3
+0.2
-0.1
+0.4
light
Succinic Acid; Light intensity 18 uM
+0.8
+0.4
+0.1
+0.6
-0.2
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