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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1226 and Rru_A1227 are separated by 140 nucleotides
Rru_A1227 and Rru_A1228 are separated by 155 nucleotides
Rru_A1228 and Rru_A1229 are separated by 106 nucleotides
Rru_A1229 and Rru_A1230 are separated by 100 nucleotides
Rru_A1226: Rru_A1226 - ATP synthase F1, beta subunit (NCBI), at 1,447,712 to 1,449,136
_A1226
Rru_A1227: Rru_A1227 - H+-transporting two-sector ATPase, delta/epsilon subunit (NCBI), at 1,449,277 to 1,449,681
_A1227
Rru_A1228: Rru_A1228 - hypothetical protein (NCBI), at 1,449,837 to 1,450,646
_A1228
Rru_A1229: Rru_A1229 - hypothetical protein (NCBI), at 1,450,753 to 1,452,069
_A1229
Rru_A1230: Rru_A1230 - NUDIX hydrolase (NCBI), at 1,452,170 to 1,452,667
_A1230
Group
Condition
Rru
_A1226
Rru
_A1227
Rru
_A1228
Rru
_A1229
Rru
_A1230
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
-0.4
-0.3
N.D.
light
acetate; Light intensity 38 uM
N.D.
N.D.
-0.1
-0.4
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
-0.3
-0.1
N.D.
carbon source
Succinate (C)_noKan
N.D.
N.D.
-0.2
-0.1
N.D.
light
Succinic Acid; Light intensity 18 uM
N.D.
N.D.
-0.1
-0.2
N.D.
light
Succinic Acid; Light intensity 75 uM
N.D.
N.D.
-0.1
-0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
N.D.
N.D.
-0.3
+0.1
N.D.
smn_rich
SMN_rich_noKan
N.D.
N.D.
-0.2
+0.1
N.D.
light
Succinic Acid; Light intensity 38 uM
N.D.
N.D.
-0.3
+0.1
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
N.D.
-0.2
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
N.D.
-0.1
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.1
+0.1
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
+0.2
+0.1
N.D.
light
acetate; Light intensity 75 uM
N.D.
N.D.
-0.1
+0.4
N.D.
carbon source
Valeric 25 mM; anaerobic
N.D.
N.D.
+0.2
+0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
+0.3
+0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
N.D.
+0.1
+0.2
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
+0.2
+0.2
N.D.
light
acetate; Light intensity 18 uM
N.D.
N.D.
+0.2
+0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.2
+0.3
N.D.
light
acetate; Light intensity 18 uM
N.D.
N.D.
-0.1
+0.6
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
+0.2
+0.4
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.3
+0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
N.D.
+0.3
+0.4
N.D.
light
Succinic Acid; Light intensity 150 uM
N.D.
N.D.
+0.4
+0.5
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
N.D.
N.D.
+0.5
+0.4
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
+0.6
+0.5
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
+0.4
+0.9
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
N.D.
+0.6
+0.7
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
N.D.
+0.7
+0.7
N.D.
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