Fitness for 5 genes in Rhodospirillum rubrum S1H

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 60 experiments or choose conditions or try the comparative fitness browser

500 ntRru_A1177 and Rru_A1178 are separated by 315 nucleotidesRru_A1178 and Rru_A1179 are separated by 107 nucleotidesRru_A1179 and Rru_A1180 overlap by 4 nucleotidesRru_A1180 and Rru_A1181 are separated by 99 nucleotides Rru_A1177: Rru_A1177 - chemotaxis sensory transducer (NCBI), at 1,392,996 to 1,394,405 _A1177 Rru_A1178: Rru_A1178 - Anticodon-binding (NCBI), at 1,394,721 to 1,395,884 _A1178 Rru_A1179: Rru_A1179 - Transcriptional Regulator, DeoR family (NCBI), at 1,395,992 to 1,396,756 _A1179 Rru_A1180: Rru_A1180 - Major facilitator superfamily MFS_1 (NCBI), at 1,396,753 to 1,397,934 _A1180 Rru_A1181: Rru_A1181 - Cell division transporter substrate-binding protein FtsY (NCBI), at 1,398,034 to 1,399,554 _A1181
Group Condition Rru_A1177 Rru_A1178 Rru_A1179 Rru_A1180 Rru_A1181
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.6 -0.5 -2.8 -2.1 N.D.
light acetate; Light intensity 9 uM +0.0 +0.2 -2.2 -1.9 N.D.
light Succinic Acid; Light intensity 18 uM -0.4 -0.5 -2.2 -0.0 N.D.
light Succinic Acid; Light intensity 75 uM -0.8 -0.3 -1.2 -0.7 N.D.
carbon source Hexanoic 21 mM; anaerobic +0.1 -0.4 -2.4 +0.5 N.D.
light acetate; Light intensity 18 uM -0.0 +0.5 -1.8 -0.8 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic -0.2 -0.1 -1.5 -0.3 N.D.
light Succinic Acid; Light intensity 9 uM -0.4 +0.3 -2.1 +0.1 N.D.
light Succinic Acid; Light intensity 9 uM +0.1 -0.1 -1.2 -0.8 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic -0.2 -0.1 -2.2 +0.7 N.D.
anaerboic nitrogen source SMN_rich_anaerobic -0.0 -0.4 -0.9 -0.4 N.D.
light acetate; Light intensity 38 uM -1.2 +0.1 -1.5 +1.2 N.D.
smn_rich SMN_rich_noKan -0.0 -0.0 -0.9 -0.4 N.D.
carbon source Succinate (C) +0.1 -0.3 -1.4 +0.4 N.D.
light Succinic Acid; Light intensity 150 uM -0.2 -0.3 -0.8 +0.1 N.D.
carbon source Succinate (C)_noKan +0.2 -0.1 -1.0 -0.2 N.D.
light acetate; Light intensity 75 uM -0.4 -0.0 -0.8 +0.3 N.D.
carbon source Valeric 25 mM; anaerobic +0.2 -0.4 -1.1 +0.6 N.D.
smn_rich SMN_rich +0.3 -0.3 -0.6 -0.1 N.D.
light acetate; Light intensity 38 uM +0.0 +0.3 -1.0 -0.0 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.3 +0.4 -1.3 +0.0 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.3 +0.2 -1.3 +0.2 N.D.
light Succinic Acid; Light intensity 150 uM -0.8 -0.4 -0.9 +1.6 N.D.
carbon source Succinate (C) +0.2 +0.2 -0.9 +0.2 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.4 -0.1 +0.8 -0.1 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.4 +0.6 +0.2 +0.7 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic +0.1 -0.1 +1.0 +0.2 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.1 +0.7 +0.0 +0.6 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.2 +0.5 +0.0 +0.6 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.3 +0.6 +0.2 +1.0 N.D.
remove
Rru_A1177
plot		 remove
Rru_A1178
plot		 remove
Rru_A1179		 remove
Rru_A1180
plot		 remove
Rru_A1181
plot