Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1167 and Rru_A1168 overlap by 8 nucleotidesRru_A1168 and Rru_A1169 overlap by 1 nucleotidesRru_A1169 and Rru_A1170 are separated by 43 nucleotidesRru_A1170 and Rru_A1171 are separated by 621 nucleotides Rru_A1167: Rru_A1167 - putative hydrogenase expression/formation protein HupK (NCBI), at 1,383,855 to 1,385,075 _A1167 Rru_A1168: Rru_A1168 - Hydrogenase expression/synthesis, HypA (NCBI), at 1,385,068 to 1,385,409 _A1168 Rru_A1169: Rru_A1169 - Hydrogenase accessory protein HypB (NCBI), at 1,385,409 to 1,386,215 _A1169 Rru_A1170: Rru_A1170 - Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI), at 1,386,259 to 1,387,704 _A1170 Rru_A1171: Rru_A1171 - Transcriptional Regulator, BadM/Rrf2 family (NCBI), at 1,388,326 to 1,388,772 _A1171
Group Condition Rru_A1167 Rru_A1168 Rru_A1169 Rru_A1170 Rru_A1171
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.2 +0.1 -0.2 -0.8 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -1.2 +0.0 +0.1 -0.6 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic -0.7 -0.6 -0.1 -0.2 N.D.
carbon source Hexanoic 21 mM; anaerobic -0.2 -1.0 -0.1 -0.2 N.D.
carbon source Valeric 25 mM; anaerobic +0.4 -1.2 -0.2 -0.3 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 -0.7 -0.5 +0.1 N.D.
light Succinic Acid; Light intensity 18 uM -0.1 -1.4 +0.5 -0.2 N.D.
light Succinic Acid; Light intensity 75 uM -1.7 +0.1 +0.2 +0.3 N.D.
carbon source Hexanoic 21 mM; anaerobic +0.1 -0.6 -0.5 -0.0 N.D.
anaerboic nitrogen source Low light with ammonium chloride +0.3 -1.0 -0.3 -0.0 N.D.
light Succinic Acid; Light intensity 9 uM -1.1 -0.1 +0.3 +0.2 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; no light -0.4 +0.8 -0.2 -0.6 N.D.
carbon source carbon source anaerobic Succinic Acid 31.25 mM +0.2 -0.8 -0.1 +0.4 N.D.
light Succinic Acid; Light intensity 38 uM -1.1 -0.0 +0.4 +0.5 N.D.
light acetate; Light intensity 18 uM +0.9 -1.6 +0.3 +0.3 N.D.
light Succinic Acid; Light intensity 150 uM -0.4 -0.4 +0.1 +0.7 N.D.
carbon source Succinic Acid 31.25 mM; anaerobic -1.5 +0.6 +0.2 +0.6 N.D.
carbon source Valeric 25 mM; anaerobic +0.3 +0.4 -0.2 -0.3 N.D.
light acetate; Light intensity 38 uM -1.1 +0.9 +0.8 -0.1 N.D.
carbon source Valeric 25 mM; anaerobic -0.5 +0.4 +0.1 +0.5 N.D.
carbon source Hexanoic 21 mM; anaerobic -0.5 +0.5 +0.4 +0.2 N.D.
light Succinic Acid; Light intensity 150 uM +0.3 -0.4 +0.8 +0.0 N.D.
light Succinic Acid; Light intensity 9 uM -0.3 +0.1 +0.5 +0.5 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.6 +0.2 +0.2 -0.1 N.D.
light Succinic Acid; Light intensity 75 uM -0.4 +0.3 +0.5 +0.4 N.D.
light Succinic Acid; Light intensity 18 uM -1.6 +1.7 -0.2 +0.9 N.D.
anaerboic nitrogen source L-Malic Acid (C) and N2; no light +0.2 +0.0 +0.2 +0.8 N.D.
light acetate; Light intensity 18 uM +0.3 +0.4 +0.4 +0.3 N.D.
light acetate; Light intensity 38 uM -0.0 +0.7 +0.3 +0.5 N.D.
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.8 +0.4 +0.2 +0.1 N.D.
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