Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1116 and Rru_A1117 are separated by 183 nucleotidesRru_A1117 and Rru_A1118 are separated by 8 nucleotidesRru_A1118 and Rru_A1119 are separated by 385 nucleotidesRru_A1119 and Rru_A1120 are separated by 176 nucleotides Rru_A1116: Rru_A1116 - Transcriptional Regulator, TetR family (NCBI), at 1,311,278 to 1,311,832 _A1116 Rru_A1117: Rru_A1117 - Secretion protein HlyD (NCBI), at 1,312,016 to 1,313,119 _A1117 Rru_A1118: Rru_A1118 - Hydrophobe/amphiphile efflux-1 HAE1 (NCBI), at 1,313,128 to 1,316,286 _A1118 Rru_A1119: Rru_A1119 - NnrS (NCBI), at 1,316,672 to 1,317,862 _A1119 Rru_A1120: Rru_A1120 - ABC transporter, transmembrane region (NCBI), at 1,318,039 to 1,319,892 _A1120
Group Condition Rru_A1116 Rru_A1117 Rru_A1118 Rru_A1119 Rru_A1120
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.7 -0.1 -0.2 +0.4 -0.5
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.5 -0.1 -0.2 +0.3 -0.5
carbon source Valeric 25 mM; anaerobic +0.1 -0.6 -0.1 -0.3 -0.1
carbon source Hexanoic 21 mM; anaerobic +0.1 -0.7 -0.0 -0.2 -0.1
light Succinic Acid; Light intensity 18 uM -0.2 -0.4 -0.0 -0.0 -0.2
carbon source Succinate (C)_noKan -0.2 -0.2 +0.0 -0.2 -0.3
carbon source Succinic Acid 31.25 mM; anaerobic +0.2 -0.6 -0.0 -0.3 -0.1
carbon source Succinate (C)_noKan -0.3 -0.0 +0.0 -0.0 -0.4
carbon source Succinate (C) -0.0 -0.2 -0.1 -0.2 -0.2
carbon source Succinate (C) -0.1 -0.1 -0.1 -0.1 -0.1
carbon source Succinate (C)_noKan -0.0 -0.1 -0.1 +0.0 -0.4
light Succinic Acid; Light intensity 9 uM -0.4 +0.1 +0.1 -0.2 -0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.3 -0.2 -0.1 +0.2 +0.1
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.1 -0.2 -0.0 -0.2 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 -0.2 -0.1 -0.1 +0.2
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light -0.1 -0.3 -0.1 -0.0 +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 -0.1 -0.1 -0.1 +0.2
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.2 -0.1 -0.1 +0.3 -0.1
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.6 -0.0 -0.2 +0.2 +0.5
light acetate; Light intensity 75 uM -0.3 -0.0 +0.0 +0.3 +0.1
carbon source Hexanoic 21 mM; anaerobic -0.1 -0.1 +0.1 +0.3 +0.1
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 +0.3 +0.0 +0.3 -0.2
carbon source Valeric 25 mM; anaerobic -0.2 +0.2 +0.1 +0.2 +0.1
carbon source Succinic Acid 31.25 mM; anaerobic -0.0 +0.3 +0.2 -0.2 +0.1
light acetate; Light intensity 9 uM -0.2 -0.1 +0.0 +0.5 +0.6
light acetate; Light intensity 18 uM -0.3 -0.0 +0.1 +0.5 +0.6
light Succinic Acid; Light intensity 18 uM -0.2 +0.5 +0.3 +0.1 +0.2
light Succinic Acid; Light intensity 150 uM +0.4 +0.5 +0.1 +0.1 +0.1
light acetate; Light intensity 38 uM -0.1 -0.0 -0.0 +0.4 +1.1
light acetate; Light intensity 38 uM -0.5 +0.7 +0.1 +0.7 +0.7
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