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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1105 and Rru_A1106 are separated by 102 nucleotides
Rru_A1106 and Rru_A1107 are separated by 118 nucleotides
Rru_A1107 and Rru_A1108 are separated by 0 nucleotides
Rru_A1108 and Rru_A1109 are separated by 313 nucleotides
Rru_A1105: Rru_A1105 - tRNA synthetase, class II (G, H, P and S) (NCBI), at 1,297,869 to 1,299,023
_A1105
Rru_A1106: Rru_A1106 - Adenylosuccinate synthase (NCBI), at 1,299,126 to 1,300,415
_A1106
Rru_A1107: Rru_A1107 - hypothetical protein (NCBI), at 1,300,534 to 1,302,567
_A1107
Rru_A1108: Rru_A1108 - hypothetical protein (NCBI), at 1,302,568 to 1,303,155
_A1108
Rru_A1109: Rru_A1109 - chemotaxis sensory transducer (NCBI), at 1,303,469 to 1,305,169
_A1109
Group
Condition
Rru
_A1105
Rru
_A1106
Rru
_A1107
Rru
_A1108
Rru
_A1109
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-5.9
N.D.
+0.0
+0.1
-0.1
carbon source
Succinate (C)_noKan
-5.2
N.D.
-0.0
-0.1
-0.2
carbon source
Succinate (C)
-5.4
N.D.
+0.1
+0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-5.3
N.D.
-0.0
+0.1
-0.0
carbon source
Succinate (C)_noKan
-5.2
N.D.
+0.0
-0.0
+0.0
carbon source
Succinate (C)
-5.1
N.D.
+0.0
+0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-4.6
N.D.
-0.0
-0.1
-0.1
carbon source
Succinate (C)
-4.6
N.D.
+0.0
+0.0
-0.0
carbon source
Hexanoic 21 mM; anaerobic
-4.5
N.D.
-0.1
+0.3
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-4.3
N.D.
+0.1
+0.1
-0.2
carbon source
Hexanoic 21 mM; anaerobic
-4.0
N.D.
-0.3
+0.2
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-4.2
N.D.
+0.2
+0.2
-0.2
carbon source
Succinate (C)_noKan
-3.9
N.D.
-0.1
+0.1
-0.1
carbon source
Valeric 25 mM; anaerobic
-3.9
N.D.
+0.1
+0.0
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-3.3
N.D.
+0.2
+0.0
-0.6
carbon source
Hexanoic 21 mM; anaerobic
-3.7
N.D.
+0.1
+0.1
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-2.8
N.D.
+0.2
-0.0
-0.6
carbon source
Valeric 25 mM; anaerobic
-3.7
N.D.
+0.1
+0.4
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-3.1
N.D.
+0.1
-0.1
+0.0
carbon source
Valeric 25 mM; anaerobic
-3.2
N.D.
+0.1
-0.0
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-2.4
N.D.
+0.1
-0.1
-0.1
carbon source
Hexanoic 21 mM; anaerobic
-2.7
N.D.
+0.2
-0.1
+0.1
carbon source
Valeric 25 mM; anaerobic
-1.9
N.D.
-0.2
-0.2
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
-2.2
N.D.
-0.1
+0.0
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-2.3
N.D.
+0.2
-0.1
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-2.4
N.D.
+0.2
+0.1
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-2.2
N.D.
+0.1
-0.0
+0.2
smn_rich
SMN_rich_noKan
-2.1
N.D.
+0.1
+0.2
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-2.2
N.D.
+0.2
+0.1
+0.2
light
Succinic Acid; Light intensity 18 uM
-1.8
N.D.
+0.4
+0.1
+0.3
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