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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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500 nt
Rru_A1074 and Rru_A1075 are separated by 151 nucleotides
Rru_A1075 and Rru_A1076 are separated by 110 nucleotides
Rru_A1076 and Rru_A1077 are separated by 141 nucleotides
Rru_A1077 and Rru_A1078 are separated by 105 nucleotides
Rru_A1074: Rru_A1074 - MotA/TolQ/ExbB proton channel family protein (NCBI), at 1,264,641 to 1,265,969
_A1074
Rru_A1075: Rru_A1075 - hypothetical protein (NCBI), at 1,266,121 to 1,267,626
_A1075
Rru_A1076: Rru_A1076 - Inositol monophosphatase (NCBI), at 1,267,737 to 1,268,528
_A1076
Rru_A1077: Rru_A1077 - Elongation factor P (NCBI), at 1,268,670 to 1,269,233
_A1077
Rru_A1078: Rru_A1078 - tRNA synthetase, class II (D, K and N) (NCBI), at 1,269,339 to 1,270,415
_A1078
Group
Condition
Rru
_A1074
Rru
_A1075
Rru
_A1076
Rru
_A1077
Rru
_A1078
smn_rich
SMN_rich_noKan
-1.9
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.8
N.D.
N.D.
N.D.
N.D.
smn_rich
SMN_rich
-1.0
N.D.
N.D.
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
-1.0
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-1.0
N.D.
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-1.0
N.D.
N.D.
N.D.
N.D.
smn_rich
SMN_rich
-0.9
N.D.
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.7
N.D.
N.D.
N.D.
N.D.
carbon source
Valeric 25 mM; anaerobic
-0.7
N.D.
N.D.
N.D.
N.D.
carbon source
Succinate (C)_noKan
-0.7
N.D.
N.D.
N.D.
N.D.
smn_rich
SMN_rich_noKan
-0.6
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.6
N.D.
N.D.
N.D.
N.D.
smn_rich
SMN_rich_noKan
-0.6
N.D.
N.D.
N.D.
N.D.
smn_rich
SMN_rich
-0.6
N.D.
N.D.
N.D.
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.4
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 9 uM
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Succinate (C)_noKan
-0.3
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
SMN_rich_anaerobic
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Succinate (C)
+0.3
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.7
N.D.
N.D.
N.D.
N.D.
light
acetate; Light intensity 18 uM
+0.7
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 75 uM
+0.8
N.D.
N.D.
N.D.
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.8
N.D.
N.D.
N.D.
N.D.
light
acetate; Light intensity 75 uM
+1.2
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 38 uM
+1.3
N.D.
N.D.
N.D.
N.D.
light
acetate; Light intensity 38 uM
+2.1
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
+2.1
N.D.
N.D.
N.D.
N.D.
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+2.8
N.D.
N.D.
N.D.
N.D.
light
Succinic Acid; Light intensity 150 uM
+4.0
N.D.
N.D.
N.D.
N.D.
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