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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A1066 and Rru_A1067 overlap by 4 nucleotides
Rru_A1067 and Rru_A1068 are separated by 1 nucleotides
Rru_A1068 and Rru_A1069 are separated by 43 nucleotides
Rru_A1069 and Rru_A1070 are separated by 103 nucleotides
Rru_A1066: Rru_A1066 - ABC transporter component (NCBI), at 1,256,531 to 1,257,316
_A1066
Rru_A1067: Rru_A1067 - Cobalamin synthesis protein/P47K (NCBI), at 1,257,313 to 1,258,014
_A1067
Rru_A1068: Rru_A1068 - Aminotransferase, class V (NCBI), at 1,258,016 to 1,259,197
_A1068
Rru_A1069: Rru_A1069 - Putative Fe-S cluster (NCBI), at 1,259,241 to 1,259,966
_A1069
Rru_A1070: Rru_A1070 - Heat shock protein Hsp20 (NCBI), at 1,260,070 to 1,260,540
_A1070
Group
Condition
Rru
_A1066
Rru
_A1067
Rru
_A1068
Rru
_A1069
Rru
_A1070
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-1.3
-0.7
-0.7
-1.4
-1.7
light
Succinic Acid; Light intensity 38 uM
-0.4
-0.1
-0.4
-0.2
-0.8
light
Succinic Acid; Light intensity 18 uM
+0.5
-0.1
-0.5
-0.4
-0.6
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.9
+0.1
-0.0
-0.5
+0.1
light
Succinic Acid; Light intensity 9 uM
+0.0
-0.1
-0.0
-0.3
-0.8
carbon source
Valeric 25 mM; anaerobic
-0.4
-0.7
-0.5
+0.4
+0.0
light
Succinic Acid; Light intensity 75 uM
-0.1
+0.1
-0.4
-0.3
-0.4
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.6
+0.2
-0.1
-0.3
-0.2
light
Succinic Acid; Light intensity 18 uM
-1.1
+0.1
+0.6
-0.2
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-0.2
+0.2
-0.5
-0.6
carbon source
Hexanoic 21 mM; anaerobic
-0.1
-0.7
-0.4
+0.4
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.8
-0.2
+0.4
-0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
+0.5
-0.0
-0.1
-0.3
carbon source
Valeric 25 mM; anaerobic
+0.6
-0.2
-0.4
+0.1
+0.2
carbon source
Hexanoic 21 mM; anaerobic
+0.4
-0.1
-0.3
+0.1
+0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.5
+0.1
-0.3
+0.4
-0.2
smn_rich
SMN_rich
+1.0
-0.3
+0.1
-0.2
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.3
+0.3
+0.3
+0.4
+0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.6
+0.7
-0.2
-0.1
-0.1
light
acetate; Light intensity 18 uM
+0.2
-0.2
-0.1
+0.2
+0.9
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.6
+0.6
-0.2
+0.0
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.1
+0.2
+0.2
+0.6
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
+0.2
+0.3
+0.1
+0.5
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
+0.5
+0.3
+0.4
+0.0
light
Succinic Acid; Light intensity 150 uM
+0.5
-0.1
-0.2
+0.1
+1.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.1
+0.6
+0.3
+0.5
+0.2
light
acetate; Light intensity 38 uM
+0.2
+0.0
+0.2
-0.1
+1.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.2
+0.6
+0.1
+0.7
+0.2
light
acetate; Light intensity 18 uM
+0.8
+0.1
+0.7
+0.9
+0.6
light
Succinic Acid; Light intensity 150 uM
+0.8
+0.6
+0.1
+0.1
+2.3
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