Fitness for 5 genes in Rhodospirillum rubrum S1H

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500 ntRru_A1002 and Rru_A1003 are separated by 3 nucleotidesRru_A1003 and Rru_A1004 are separated by 99 nucleotidesRru_A1004 and Rru_A1005 are separated by 324 nucleotidesRru_A1005 and Rru_A1006 are separated by 222 nucleotides Rru_A1002: Rru_A1002 - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI), at 1,188,229 to 1,189,326 _A1002 Rru_A1003: Rru_A1003 - Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI), at 1,189,330 to 1,190,526 _A1003 Rru_A1004: Rru_A1004 - Lysine-arginine-ornithine-binding periplasmic protein (NCBI), at 1,190,626 to 1,191,648 _A1004 Rru_A1005: Rru_A1005 - Glycosyl transferase, family 2 (NCBI), at 1,191,973 to 1,193,007 _A1005 Rru_A1006: Rru_A1006 - Acyltransferase 3 (NCBI), at 1,193,230 to 1,194,330 _A1006
Group Condition Rru_A1002 Rru_A1003 Rru_A1004 Rru_A1005 Rru_A1006
carbon source Hexanoic 21 mM; anaerobic -0.2 -0.3 -0.8 N.D. +0.1
carbon source Hexanoic 21 mM; anaerobic -0.4 -0.4 -0.2 N.D. -0.1
carbon source Hexanoic 21 mM; anaerobic -0.3 -0.4 -0.2 N.D. +0.1
carbon source Hexanoic 21 mM; anaerobic -0.2 -0.4 -0.4 N.D. +0.3
light acetate; Light intensity 9 uM -0.3 +0.1 -0.2 N.D. -0.3
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.0 -0.1 -0.2 N.D. -0.2
light acetate; Light intensity 38 uM -0.2 -0.2 -0.1 N.D. +0.0
anaerboic nitrogen source L-Malic Acid (C) and N2; no light -0.1 -0.1 -0.4 N.D. -0.0
light acetate; Light intensity 18 uM +0.1 +0.1 -0.2 N.D. -0.2
light Succinic Acid; Light intensity 18 uM -0.0 -0.1 +0.2 N.D. -0.2
anaerboic nitrogen source L-Malic Acid (C) and N2; high light -0.1 -0.1 -0.1 N.D. +0.2
carbon source Valeric 25 mM; anaerobic -0.2 -0.1 -0.1 N.D. +0.3
carbon source Hexanoic 21 mM; anaerobic +0.2 -0.1 +0.1 N.D. -0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light -0.1 +0.0 -0.2 N.D. +0.3
carbon source Succinic Acid 31.25 mM; anaerobic -0.1 +0.0 -0.1 N.D. +0.4
carbon source Succinic Acid 31.25 mM; anaerobic -0.0 -0.1 +0.3 N.D. +0.1
carbon source Succinic Acid 31.25 mM; anaerobic +0.5 +0.0 -0.2 N.D. +0.2
anaerboic nitrogen source L-Malic Acid (C) with ammonium chloride; high light +0.1 +0.0 +0.2 N.D. +0.2
anaerboic nitrogen source L-Malic Acid (C) and N2; anaerobic; high light +0.1 +0.1 +0.2 N.D. +0.2
light Succinic Acid; Light intensity 9 uM +0.3 +0.1 +0.2 N.D. +0.0
light Succinic Acid; Light intensity 9 uM +0.3 +0.2 +0.2 N.D. -0.1
light acetate; Light intensity 18 uM +0.2 +0.1 +0.1 N.D. +0.2
light Succinic Acid; Light intensity 150 uM +0.1 +0.1 +0.5 N.D. +0.0
light Succinic Acid; Light intensity 150 uM +0.2 +0.4 +0.3 N.D. +0.1
carbon source Valeric 25 mM; anaerobic +0.4 -0.1 +0.3 N.D. +0.3
light Succinic Acid; Light intensity 75 uM +0.4 +0.2 +0.3 N.D. +0.0
carbon source Succinic Acid 31.25 mM; anaerobic +0.4 +0.3 +0.3 N.D. -0.0
carbon source carbon source anaerobic Succinic Acid 31.25 mM -0.2 +0.6 +0.7 N.D. -0.1
light acetate; Light intensity 38 uM +0.9 -0.2 +0.3 N.D. +0.3
light Succinic Acid; Light intensity 18 uM +0.5 +0.6 +0.2 N.D. +0.2
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