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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0888 and Rru_A0889 are separated by 192 nucleotides
Rru_A0889 and Rru_A0890 are separated by 86 nucleotides
Rru_A0890 and Rru_A0891 are separated by 139 nucleotides
Rru_A0891 and Rru_A0892 are separated by 32 nucleotides
Rru_A0888: Rru_A0888 - Transcriptional Regulator, TetR family (NCBI), at 1,065,421 to 1,066,032
_A0888
Rru_A0889: Rru_A0889 - hypothetical protein (NCBI), at 1,066,225 to 1,066,587
_A0889
Rru_A0890: Rru_A0890 - Integral membrane protein TerC (NCBI), at 1,066,674 to 1,067,690
_A0890
Rru_A0891: Rru_A0891 - Tellurite resistance TerB (NCBI), at 1,067,830 to 1,068,282
_A0891
Rru_A0892: Rru_A0892 - stress protein (NCBI), at 1,068,315 to 1,069,571
_A0892
Group
Condition
Rru
_A0888
Rru
_A0889
Rru
_A0890
Rru
_A0891
Rru
_A0892
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.1
N.D.
-2.5
N.D.
-1.9
carbon source
Valeric 25 mM; anaerobic
-0.5
N.D.
-0.6
N.D.
-1.6
carbon source
Hexanoic 21 mM; anaerobic
-0.4
N.D.
-0.3
N.D.
-1.7
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
N.D.
-0.7
N.D.
-1.1
light
Succinic Acid; Light intensity 75 uM
-0.3
N.D.
-0.5
N.D.
-0.7
light
acetate; Light intensity 75 uM
-0.4
N.D.
-0.4
N.D.
-0.8
light
acetate; Light intensity 18 uM
-0.4
N.D.
-0.4
N.D.
-0.6
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
N.D.
-0.1
N.D.
-1.1
light
acetate; Light intensity 38 uM
+0.1
N.D.
-0.2
N.D.
-1.1
light
Succinic Acid; Light intensity 9 uM
-0.2
N.D.
-0.4
N.D.
-0.5
carbon source
Hexanoic 21 mM; anaerobic
-0.2
N.D.
-0.2
N.D.
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
N.D.
-0.8
N.D.
-0.1
light
Succinic Acid; Light intensity 9 uM
-0.3
N.D.
-0.2
N.D.
-0.5
carbon source
Hexanoic 21 mM; anaerobic
-0.0
N.D.
-0.3
N.D.
-0.6
light
acetate; Light intensity 38 uM
-0.1
N.D.
-0.2
N.D.
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.0
N.D.
-0.7
N.D.
-0.2
light
Succinic Acid; Light intensity 18 uM
-0.3
N.D.
-0.6
N.D.
+0.1
light
Succinic Acid; Light intensity 18 uM
-0.0
N.D.
-0.1
N.D.
-0.7
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.0
N.D.
-0.1
N.D.
-0.7
smn_rich
SMN_rich
-0.2
N.D.
-0.2
N.D.
-0.3
light
Succinic Acid; Light intensity 75 uM
-0.0
N.D.
-0.5
N.D.
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.0
N.D.
-0.6
N.D.
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
-0.1
N.D.
-0.7
N.D.
+0.1
light
acetate; Light intensity 9 uM
-0.2
N.D.
-0.2
N.D.
-0.3
anaerboic nitrogen source
L-Malic Acid (C) and N2; high light
-0.1
N.D.
+0.1
N.D.
-0.5
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
N.D.
+0.2
N.D.
-0.4
carbon source
Hexanoic 21 mM; anaerobic
+0.0
N.D.
-0.7
N.D.
+0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.0
N.D.
+0.3
N.D.
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
N.D.
-0.5
N.D.
+0.2
light
Succinic Acid; Light intensity 150 uM
-0.2
N.D.
+0.5
N.D.
+0.7
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