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Protein
Homologs
Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0852 and Rru_A0853 overlap by 2 nucleotides
Rru_A0853 and Rru_A0854 are separated by 99 nucleotides
Rru_A0854 and Rru_A0855 are separated by 22 nucleotides
Rru_A0855 and Rru_A0856 are separated by 148 nucleotides
Rru_A0852: Rru_A0852 - hypothetical protein (NCBI), at 1,015,611 to 1,015,898
_A0852
Rru_A0853: Rru_A0853 - hypothetical protein (NCBI), at 1,015,897 to 1,016,982
_A0853
Rru_A0854: Rru_A0854 - Sulfotransferase (NCBI), at 1,017,082 to 1,017,981
_A0854
Rru_A0855: Rru_A0855 - Asparagine synthase (NCBI), at 1,018,004 to 1,019,938
_A0855
Rru_A0856: Rru_A0856 - hypothetical protein (NCBI), at 1,020,087 to 1,020,992
_A0856
Group
Condition
Rru
_A0852
Rru
_A0853
Rru
_A0854
Rru
_A0855
Rru
_A0856
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.7
-1.1
-1.4
-0.1
N.D.
carbon source
Valeric 25 mM; anaerobic
-1.1
+0.2
-0.5
-0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.4
-1.0
+0.1
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.4
-0.9
-0.1
+0.2
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.3
-0.3
-0.9
+0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.6
+0.0
-0.5
+0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.9
+0.0
-0.1
-0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-1.3
+0.3
+0.1
-0.2
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.8
+0.1
-0.1
-0.1
N.D.
carbon source
Valeric 25 mM; anaerobic
+0.2
-0.7
-0.5
+0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.3
-0.4
-0.7
-0.0
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.3
-0.4
-0.6
+0.1
N.D.
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.5
+0.1
-0.0
-0.2
N.D.
carbon source
Hexanoic 21 mM; anaerobic
-0.5
+0.1
+0.2
-0.3
N.D.
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.6
+0.1
-0.2
+0.3
N.D.
light
Succinic Acid; Light intensity 75 uM
+0.1
-0.2
-0.4
+0.1
N.D.
light
Succinic Acid; Light intensity 150 uM
+0.1
-0.3
-0.4
+0.2
N.D.
carbon source
Valeric 25 mM; anaerobic
-0.2
-0.3
+0.2
-0.2
N.D.
light
acetate; Light intensity 38 uM
+0.1
-0.2
-0.5
+0.2
N.D.
light
Succinic Acid; Light intensity 75 uM
-0.4
+0.1
+0.1
-0.2
N.D.
light
acetate; Light intensity 75 uM
+0.4
-0.3
-0.5
+0.1
N.D.
light
acetate; Light intensity 38 uM
-0.6
+0.2
+0.2
-0.1
N.D.
light
acetate; Light intensity 18 uM
-0.1
-0.0
-0.4
+0.3
N.D.
carbon source
Hexanoic 21 mM; anaerobic
+0.5
-0.1
-0.3
-0.1
N.D.
light
Succinic Acid; Light intensity 18 uM
-0.1
+0.9
-0.6
-0.1
N.D.
light
Succinic Acid; Light intensity 150 uM
-0.3
+0.2
+0.3
+0.0
N.D.
smn_rich
SMN_rich_noKan
+0.2
+0.3
+0.2
-0.1
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.2
-0.1
+0.6
-0.0
N.D.
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.1
+0.0
+0.4
+0.2
N.D.
light
acetate; Light intensity 18 uM
-0.1
+0.3
+0.8
-0.1
N.D.
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