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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_AR0023 and Rru_A0771 are separated by 573 nucleotides
Rru_A0771 and Rru_A0772 are separated by 232 nucleotides
Rru_A0772 and Rru_A0773 are separated by 5 nucleotides
Rru_A0773 and Rru_A0774 are separated by 30 nucleotides
Rru_AR0023: Rru_AR0023 - tRNA-Met (NCBI), at 916,723 to 916,799
_AR0023
Rru_A0771: Rru_A0771 - hypothetical protein (NCBI), at 917,373 to 921,860
_A0771
Rru_A0772: Rru_A0772 - Oxidoreductase/nitrogenase, component 1 (NCBI), at 922,093 to 923,418
_A0772
Rru_A0773: Rru_A0773 - Nitrogenase (NCBI), at 923,424 to 924,887
_A0773
Rru_A0774: Rru_A0774 - O-acetylhomoserine/O-acetylserine sulfhydrylase (NCBI), at 924,918 to 926,234
_A0774
Group
Condition
Rru
_AR0023
Rru
_A0771
Rru
_A0772
Rru
_A0773
Rru
_A0774
carbon source
Valeric 25 mM; anaerobic
N.D.
-0.1
-0.3
-0.7
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.2
-0.2
-0.2
-0.5
carbon source
Hexanoic 21 mM; anaerobic
N.D.
-0.2
-0.1
-0.5
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
-0.2
-0.2
-0.2
-0.4
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
-0.1
-0.0
-0.4
-0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.1
-0.3
-0.1
-0.1
light
acetate; Light intensity 18 uM
N.D.
-0.0
-0.2
-0.2
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.1
-0.2
-0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
N.D.
-0.1
-0.3
-0.1
+0.0
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
N.D.
-0.1
-0.2
-0.2
+0.1
smn_rich
SMN_rich
N.D.
+0.0
-0.1
-0.2
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.0
+0.1
-0.2
-0.2
light
Succinic Acid; Light intensity 75 uM
N.D.
-0.1
-0.1
-0.2
+0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.0
-0.3
+0.0
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.0
-0.1
-0.2
+0.2
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
N.D.
+0.0
+0.1
-0.2
-0.1
light
acetate; Light intensity 75 uM
N.D.
-0.1
+0.2
-0.0
-0.2
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
N.D.
+0.2
+0.2
-0.2
-0.2
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.0
-0.1
-0.1
+0.1
light
Succinic Acid; Light intensity 18 uM
N.D.
-0.1
+0.2
-0.2
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
N.D.
+0.1
+0.2
-0.1
-0.1
light
Succinic Acid; Light intensity 150 uM
N.D.
-0.0
+0.4
-0.4
-0.0
light
acetate; Light intensity 18 uM
N.D.
-0.1
+0.1
-0.1
+0.1
carbon source
Valeric 25 mM; anaerobic
N.D.
+0.0
+0.2
-0.1
+0.1
smn_rich
SMN_rich
N.D.
+0.0
+0.2
+0.1
-0.0
light
Succinic Acid; Light intensity 18 uM
N.D.
+0.0
-0.2
+0.2
+0.3
carbon source
Hexanoic 21 mM; anaerobic
N.D.
+0.1
+0.2
-0.1
+0.1
anaerboic nitrogen source
Low light with ammonium chloride
N.D.
-0.0
+0.2
+0.1
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.1
+0.4
-0.0
+0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
N.D.
+0.2
+0.2
+0.2
-0.0
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