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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0761 and Rru_A0762 are separated by 38 nucleotides
Rru_A0762 and Rru_A0763 overlap by 4 nucleotides
Rru_A0763 and Rru_A0764 overlap by 1 nucleotides
Rru_A0764 and Rru_A0765 are separated by 378 nucleotides
Rru_A0761: Rru_A0761 - Radical SAM (NCBI), at 893,961 to 895,472
_A0761
Rru_A0762: Rru_A0762 - Fe-S oxidoreductase (NCBI), at 895,511 to 896,965
_A0762
Rru_A0763: Rru_A0763 - Radical SAM (NCBI), at 896,962 to 898,026
_A0763
Rru_A0764: Rru_A0764 - HesB/YadR/YfhF (NCBI), at 898,026 to 898,340
_A0764
Rru_A0765: Rru_A0765 - hypothetical protein (NCBI), at 898,719 to 902,156
_A0765
Group
Condition
Rru
_A0761
Rru
_A0762
Rru
_A0763
Rru
_A0764
Rru
_A0765
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.5
+0.0
-0.6
-1.9
-0.3
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.4
-0.0
-0.5
-1.1
-0.3
carbon source
Valeric 25 mM; anaerobic
+0.1
-0.1
-0.2
-1.1
+0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.0
-0.1
-0.3
-0.9
+0.0
light
Succinic Acid; Light intensity 18 uM
+0.2
-0.0
+0.4
-1.4
-0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.0
-0.1
-0.1
-0.6
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
-0.1
-0.4
-0.3
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
-0.1
-0.3
-0.4
+0.1
smn_rich
SMN_rich
-0.0
+0.0
-0.1
-0.5
+0.1
carbon source
Valeric 25 mM; anaerobic
+0.1
-0.0
-0.3
-0.2
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.0
+0.1
-0.1
-0.3
+0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
-0.1
-0.1
+0.2
-0.3
+0.0
light
Succinic Acid; Light intensity 38 uM
+0.2
+0.1
-0.2
-0.2
-0.1
light
acetate; Light intensity 38 uM
+0.2
+0.0
+0.0
-0.3
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.2
-0.0
+0.0
-0.5
+0.1
light
Succinic Acid; Light intensity 9 uM
+0.0
-0.1
+0.1
-0.3
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
-0.1
+0.1
-0.3
+0.0
light
acetate; Light intensity 18 uM
-0.2
-0.0
+0.2
+0.2
-0.1
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.1
-0.1
-0.1
+0.4
-0.0
light
acetate; Light intensity 75 uM
+0.1
+0.1
-0.1
+0.3
-0.2
light
Succinic Acid; Light intensity 18 uM
+0.1
+0.1
-0.4
+0.2
+0.2
light
acetate; Light intensity 18 uM
+0.1
+0.1
+0.3
+0.1
-0.3
light
acetate; Light intensity 38 uM
+0.0
-0.2
-0.0
+0.4
+0.2
light
Succinic Acid; Light intensity 150 uM
-0.2
-0.2
-0.3
+1.2
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
-0.2
-0.1
+0.4
+0.4
+0.1
light
Succinic Acid; Light intensity 150 uM
-0.1
-0.1
+0.1
+0.6
+0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
+0.1
+0.4
-0.1
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.0
+0.1
+0.2
+0.6
-0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
-0.0
+0.2
+0.4
+0.4
+0.3
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.1
+0.1
+0.3
+0.9
-0.1
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