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Fitness for 5 genes in
Rhodospirillum rubrum S1H
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Rru_A0758 and Rru_A0759 are separated by 331 nucleotides
Rru_A0759 and Rru_A0760 are separated by 45 nucleotides
Rru_A0760 and Rru_A0761 are separated by 39 nucleotides
Rru_A0761 and Rru_A0762 are separated by 38 nucleotides
Rru_A0758: Rru_A0758 - Transcriptional Regulator, AraC family (NCBI), at 890,318 to 891,334
_A0758
Rru_A0759: Rru_A0759 - Aldo/keto reductase (NCBI), at 891,666 to 892,574
_A0759
Rru_A0760: Rru_A0760 - hypothetical protein (NCBI), at 892,620 to 893,921
_A0760
Rru_A0761: Rru_A0761 - Radical SAM (NCBI), at 893,961 to 895,472
_A0761
Rru_A0762: Rru_A0762 - Fe-S oxidoreductase (NCBI), at 895,511 to 896,965
_A0762
Group
Condition
Rru
_A0758
Rru
_A0759
Rru
_A0760
Rru
_A0761
Rru
_A0762
light
acetate; Light intensity 18 uM
+0.1
-0.3
-0.5
-0.2
-0.0
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.1
-0.4
+0.2
-0.5
+0.0
light
Succinic Acid; Light intensity 75 uM
-0.4
-0.2
-0.0
-0.1
-0.1
light
Succinic Acid; Light intensity 150 uM
-0.3
-0.1
+0.1
-0.2
-0.2
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
-0.0
-0.4
+0.2
-0.4
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.2
-0.3
-0.2
+0.0
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; anaerobic; high light
+0.1
-0.1
-0.3
-0.1
-0.0
light
Succinic Acid; Light intensity 150 uM
-0.1
+0.1
+0.1
-0.1
-0.1
light
acetate; Light intensity 38 uM
-0.3
+0.2
+0.1
+0.0
-0.2
carbon source
Succinic Acid 31.25 mM; anaerobic
+0.0
-0.1
-0.2
+0.0
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
+0.0
-0.2
+0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.0
+0.2
-0.3
+0.0
+0.1
smn_rich
SMN_rich_noKan
-0.1
+0.2
+0.2
-0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.1
-0.1
+0.3
-0.1
-0.0
light
Succinic Acid; Light intensity 18 uM
+0.1
+0.2
-0.3
+0.1
+0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.2
-0.1
+0.4
-0.2
-0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; high light
+0.0
+0.1
-0.2
+0.1
+0.1
carbon source
Valeric 25 mM; anaerobic
-0.2
+0.4
-0.2
+0.1
+0.1
light
Succinic Acid; Light intensity 18 uM
-0.3
-0.3
+0.6
+0.2
-0.0
carbon source
Valeric 25 mM; anaerobic
+0.2
-0.2
+0.3
+0.1
-0.0
light
Succinic Acid; Light intensity 9 uM
-0.1
+0.1
+0.2
+0.2
+0.1
anaerboic nitrogen source
L-Malic Acid (C) with ammonium chloride; no light
+0.1
+0.2
-0.1
+0.2
-0.0
carbon source
Succinic Acid 31.25 mM; anaerobic
-0.2
+0.5
-0.1
+0.1
+0.1
carbon source
Hexanoic 21 mM; anaerobic
-0.0
+0.4
+0.0
-0.0
+0.1
carbon source
Hexanoic 21 mM; anaerobic
+0.4
+0.1
-0.0
+0.1
-0.1
anaerboic nitrogen source
L-Malic Acid (C) and N2; no light
+0.1
-0.2
+0.4
+0.2
-0.0
light
acetate; Light intensity 75 uM
-0.0
+0.0
+0.4
+0.1
+0.1
light
acetate; Light intensity 9 uM
+0.1
+0.1
+0.4
+0.1
+0.0
light
acetate; Light intensity 18 uM
+0.1
+0.0
+0.8
+0.1
+0.1
carbon source
carbon source anaerobic Succinic Acid 31.25 mM
+0.1
+0.6
+0.2
-0.0
+0.2
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